RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 NME8Q8N427 588 aa19.36■□□□□ 0.69
TRIM39-209ENST00000428728 ZNF689Q96CS4 500 aaPredicted RBP19.36■□□□□ 0.69
TRIM39-209ENST00000428728 C5orf67F2Z3F1 127 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 H3BQ06 376 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-209ENST00000428728 PSAPP07602 524 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 COL9A1P20849 921 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 GATMP50440 423 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 NLRP5P59047 1200 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 LEXMQ3ZCV2 418 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 SMAP1Q8IYB5 467 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-209ENST00000428728 KIAA0319LQ8IZA0 1049 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 CLP1Q92989 425 aaKnown RBP19.35■□□□□ 0.69
TRIM39-209ENST00000428728 LENG9Q96B70 501 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 LARP6Q9BRS8 491 aaKnown RBP19.35■□□□□ 0.69
TRIM39-209ENST00000428728 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
TRIM39-209ENST00000428728 TMX1Q9H3N1 280 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 CDHR5Q9HBB8 845 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 GABBR1Q9UBS5 961 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 SAMM50Q9Y512 469 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
TRIM39-209ENST00000428728 MRPL42Q9Y6G3 142 aaKnown RBP19.35■□□□□ 0.69
TRIM39-209ENST00000428728 BDP1A6H8Y1 2624 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 RPS6KA5O75582 802 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 C22orf31O95567 290 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 RB1P06400 928 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 STAG3L1P0CL83 205 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 IL9P15248 144 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 CIITAP33076 1130 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 EVCP57679 992 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 KIZQ2M2Z5 673 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 CMTR2Q8IYT2 770 aaKnown RBP19.34■□□□□ 0.69
TRIM39-209ENST00000428728 METTL13Q8N6R0 699 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-209ENST00000428728 TMEM40Q8WWA1 233 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 BBXQ8WY36 941 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-209ENST00000428728 ZSWIM6Q9HCJ5 1215 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 ERVK-5Q9HDB9 667 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 RAPGEFL1Q9UHV5 662 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 LRFN2Q9ULH4 789 aa19.34■□□□□ 0.69
TRIM39-209ENST00000428728 NOC2LQ9Y3T9 749 aaKnown RBP19.34■□□□□ 0.69
TRIM39-209ENST00000428728 MAFBQ9Y5Q3 323 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-209ENST00000428728 WDR64B1ANS9 1081 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 CHMP2AO43633 222 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 MGEA5O60502 916 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 VTNP04004 478 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 SSRP1Q08945 709 aaKnown RBP19.33■□□□□ 0.68
TRIM39-209ENST00000428728 STK3Q13188 491 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 PTCRAQ6ISU1 281 aaPredicted RBP19.33■□□□□ 0.68
TRIM39-209ENST00000428728 OSMRQ99650 979 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 LMAN2LQ9H0V9 348 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 CLDND1Q9NY35 253 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 PCDHA10Q9Y5I2 948 aa19.33■□□□□ 0.68
TRIM39-209ENST00000428728 DENND3A2RUS2 1198 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 CPLX1O14810 134 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 CLCN3P51790 818 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 CRIPAKQ8N1N5 446 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 GJA10Q969M2 543 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 PABPC5Q96DU9 382 aaKnown RBP19.32■□□□□ 0.68
TRIM39-209ENST00000428728 EPHX3Q9H6B9 360 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 ALG13Q9NP73 1137 aaKnown RBP19.32■□□□□ 0.68
TRIM39-209ENST00000428728 SH3GLB2Q9NR46 395 aa19.32■□□□□ 0.68
TRIM39-209ENST00000428728 MSH4O15457 936 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 EDIL3O43854 480 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 GAS7O60861 476 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 MMP1P03956 469 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 NEFLP07196 543 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 SARSP49591 514 aaKnown RBP19.31■□□□□ 0.68
TRIM39-209ENST00000428728 NEK9Q8TD19 979 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 TBCKQ8TEA7 893 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 KHSRPQ92945 711 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRIM39-209ENST00000428728 FAM167AQ96KS9 214 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 ADAM2Q99965 735 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 PLVAPQ9BX97 442 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 C1QTNF1Q9BXJ1 281 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 CD320Q9NPF0 282 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 DISC1Q9NRI5 854 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 ST3GAL5Q9UNP4 418 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 CEP131Q9UPN4 1083 aa19.31■□□□□ 0.68
TRIM39-209ENST00000428728 ARID2Q68CP9 1835 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
TRIM39-209ENST00000428728 ZNF862O60290 1169 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 PRKCEQ02156 737 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 UGCGQ16739 394 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 ODR4Q5SWX8 454 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 LRCH2Q5VUJ6 765 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 FAM228AQ86W67 206 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 LRRC71Q8N4P6 559 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 AIFM3Q96NN9 605 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 TEKT3Q9BXF9 490 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 UNC45AQ9H3U1 944 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 PCDHA4Q9UN74 947 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 AKT3Q9Y243 479 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 PCDHB7Q9Y5E2 793 aa19.3■□□□□ 0.68
TRIM39-209ENST00000428728 GRXCR2A6NFK2 248 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 GPR182O15218 404 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 DEXIO95424 95 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 TDP2O95551 362 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 OATP04181 439 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 ITGB1P05556 798 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms