RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 SPATA31C1P0DKV0 1188 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
GHDC-203ENST00000428494 SPRED3Q2MJR0 410 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 QRICH1Q2TAL8 776 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 PPP1R18Q6NYC8 613 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 C15orf52Q6ZUT6 534 aaKnown RBP17.16■□□□□ 0.34
GHDC-203ENST00000428494 FRMD5Q7Z6J6 570 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 SLC12A6Q9UHW9 1150 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 SERPINB13Q9UIV8 391 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 TRAF3IP3Q9Y228 551 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 LOC102724159A0A0B4J2E5 919 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 CES2O00748 559 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 RGL2O15211 777 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 SHMT1P34896 483 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 SPIRE1Q08AE8 756 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 PWP2Q15269 919 aaKnown RBP17.16■□□□□ 0.34
GHDC-203ENST00000428494 C10orf76Q5T2E6 689 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 LRIG3Q6UXM1 1119 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 C1orf131Q8NDD1 294 aaKnown RBP17.16■□□□□ 0.34
GHDC-203ENST00000428494 ANO3Q9BYT9 981 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 GCNT4Q9P109 453 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 FLOT1O75955 427 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 H2AFZP0C0S5 128 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 H2AFVQ71UI9 128 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 NT5DC3Q86UY8 548 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 LRRC45Q96CN5 670 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 TRIM51Q9BSJ1 452 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
GHDC-203ENST00000428494 STXBP5LQ9Y2K9 1186 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 BZW2Q9Y6E2 419 aaKnown RBP17.15■□□□□ 0.34
GHDC-203ENST00000428494 ATAD5Q96QE3 1844 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 CLSTN1O94985 981 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
GHDC-203ENST00000428494 SCNN1DP51172 638 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 GALCP54803 685 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 DHX9Q08211 1270 aaKnown RBP17.15■□□□□ 0.34
GHDC-203ENST00000428494 MICALCLQ6ZW33 695 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 SPATS2Q86XZ4 545 aaKnown RBP17.15■□□□□ 0.34
GHDC-203ENST00000428494 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 SLC35C1Q96A29 364 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 CEP89Q96ST8 783 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 PAGR1Q9BTK6 254 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 PLIN4Q96Q06 1357 aa17.15■□□□□ 0.34
GHDC-203ENST00000428494 GMNCA6NCL1 334 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 BHMG1C9JSJ3 638 aaPredicted RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 FGGP02679 453 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 NR3C1P04150 777 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 ABCB4P21439 1286 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 PRKCIP41743 596 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 IFI16Q16666 785 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 C6orf89Q6UWU4 347 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 EPM2AIP1Q7L775 607 aaPredicted RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 GLYCTKQ8IVS8 523 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 MAGOHBQ96A72 148 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 CABS1Q96KC9 395 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 DNM3Q9UQ16 869 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 ATXN2Q99700 1313 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 MEIS2O14770 477 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 JAM2P57087 298 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 SF3A3Q12874 501 aaKnown RBP eCLIP17.14■□□□□ 0.33
GHDC-203ENST00000428494 PRPF4BQ13523 1007 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 SWT1Q5T5J6 900 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 TMC3Q7Z5M5 1100 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 KSR1Q8IVT5 923 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 CCDC13Q8IYE1 715 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 CYP2W1Q8TAV3 490 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 CALR3Q96L12 384 aaKnown RBP17.14■□□□□ 0.33
GHDC-203ENST00000428494 RUSC1Q9BVN2 902 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 BHMT2Q9H2M3 363 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 PPP1R9AQ9ULJ8 1098 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 ASTN1O14525 1302 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
GHDC-203ENST00000428494 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 BUB1BO60566 1050 aaPredicted RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 GCNT3O95395 438 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 YTHDF3Q7Z739 585 aaKnown RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 ZFPM1Q8IX07 1006 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 ETNPPLQ8TBG4 499 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 CD248Q9HCU0 757 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 USP40Q9NVE5 1235 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 FAM86B1E9PN63 330 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 PDXKO00764 312 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 TRAPPC3O43617 180 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 EVI5O60447 810 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms