RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 PPP4R3AQ6IN85 833 aa23.27■■□□□ 1.32
HSPG2-205ENST00000427897 TOP1MTQ969P6 601 aa23.27■■□□□ 1.32
HSPG2-205ENST00000427897 MBOAT7Q96N66 472 aa23.27■■□□□ 1.32
HSPG2-205ENST00000427897 TGS1Q96RS0 853 aaKnown RBP23.27■■□□□ 1.32
HSPG2-205ENST00000427897 MTUS1Q9ULD2 1270 aa23.27■■□□□ 1.32
HSPG2-205ENST00000427897 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 RFXAPO00287 272 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 CD52P31358 61 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 PRKCEQ02156 737 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 NFX1Q12986 1120 aaKnown RBP23.26■■□□□ 1.31
HSPG2-205ENST00000427897 NR5A1Q13285 461 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 EFCAB12Q6NXP0 572 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 FAM184AQ8NB25 1140 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 MAP7D2Q96T17 732 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 FTHL17Q9BXU8 183 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 TSPYL2Q9H2G4 693 aaPredicted RBP23.26■■□□□ 1.31
HSPG2-205ENST00000427897 SEPT9Q9UHD8 586 aaPredicted RBP23.26■■□□□ 1.31
HSPG2-205ENST00000427897 IGSF9BQ9UPX0 1349 aa23.26■■□□□ 1.31
HSPG2-205ENST00000427897 SLC37A4O43826 429 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 DKC1O60832 514 aaKnown RBP eCLIP23.25■■□□□ 1.31
HSPG2-205ENST00000427897 MMP1P03956 469 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 ADGRE1Q14246 886 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 DIS3L2Q8IYB7 885 aaKnown RBP23.25■■□□□ 1.31
HSPG2-205ENST00000427897 KIAA0319LQ8IZA0 1049 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 ETNPPLQ8TBG4 499 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 PPP1R16BQ96T49 567 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 SH2B1Q9NRF2 756 aaPredicted RBP23.25■■□□□ 1.31
HSPG2-205ENST00000427897 AKT3Q9Y243 479 aa23.25■■□□□ 1.31
HSPG2-205ENST00000427897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.24■■□□□ 1.31
HSPG2-205ENST00000427897 ENPP3O14638 875 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 C22orf31O95567 290 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 TBC1D8BQ0IIM8 1120 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 GNL2Q13823 731 aaKnown RBP23.24■■□□□ 1.31
HSPG2-205ENST00000427897 KRT40Q6A162 431 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 LLPHQ9BRT6 129 aaKnown RBP23.24■■□□□ 1.31
HSPG2-205ENST00000427897 AGO3Q9H9G7 860 aaKnown RBP23.24■■□□□ 1.31
HSPG2-205ENST00000427897 SUGCTQ9HAC7 445 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 PADI3Q9ULW8 664 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 COL6A3P12111 3177 aa23.24■■□□□ 1.31
HSPG2-205ENST00000427897 LINC01553A4QN01 128 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 DDX11L8A8MPP1 907 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 ZBTB42B2RXF5 422 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 BTBD18B2RXH4 712 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 TBX3O15119 743 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 ST18O60284 1047 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 ZNF862O60290 1169 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 RPS6KA5O75582 802 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 ARHGEF15O94989 841 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 VTNP04004 478 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 IBSPP21815 317 aaPredicted RBP23.23■■□□□ 1.31
HSPG2-205ENST00000427897 GUCY1B3Q02153 619 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 SKIV2LQ15477 1246 aaKnown RBP23.23■■□□□ 1.31
HSPG2-205ENST00000427897 UGCGQ16739 394 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 MTERF2Q49AM1 385 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 XKR3Q5GH77 459 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 SLFN12Q8IYM2 578 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 C8orf76Q96K31 380 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 SCLT1Q96NL6 688 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 KDM3AQ9Y4C1 1321 aa23.23■■□□□ 1.31
HSPG2-205ENST00000427897 SIP14410 1827 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 EVPLQ92817 2033 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 GPR182O15218 404 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 RBM25P49756 843 aaKnown RBP23.22■■□□□ 1.31
HSPG2-205ENST00000427897 CLCN3P51790 818 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 CRYBB1P53674 252 aaPredicted RBP23.22■■□□□ 1.31
HSPG2-205ENST00000427897 PSMC5P62195 406 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 HMGN5P82970 282 aaKnown RBP23.22■■□□□ 1.31
HSPG2-205ENST00000427897 HTRA4P83105 476 aaPredicted RBP23.22■■□□□ 1.31
HSPG2-205ENST00000427897 MKRN4PQ13434 485 aaPredicted RBP23.22■■□□□ 1.31
HSPG2-205ENST00000427897 KIZQ2M2Z5 673 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 TMEM266Q2M3C6 531 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 BANK1Q8NDB2 785 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 LRFN2Q9ULH4 789 aa23.22■■□□□ 1.31
HSPG2-205ENST00000427897 STAG3L1P0CL83 205 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 DNM2P50570 870 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 ERVK-21P61565 698 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 PPP2R5CQ13362 524 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 RABEP1Q15276 862 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 EARS2Q5JPH6 523 aaKnown RBP23.21■■□□□ 1.31
HSPG2-205ENST00000427897 NCAPH2Q6IBW4 605 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 POTEDQ86YR6 584 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 LRRC71Q8N4P6 559 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 SAMD11Q96NU1 681 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 KCNMB3Q9NPA1 279 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 RNF216Q9NWF9 866 aaPredicted RBP23.21■■□□□ 1.31
HSPG2-205ENST00000427897 WDR81Q562E7 1941 aa23.21■■□□□ 1.31
HSPG2-205ENST00000427897 LOXHD1Q8IVV2 1947 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 DENND3A2RUS2 1198 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 FAM205CA6NFA0 338 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 ATP2B1P20020 1258 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 QARSP47897 775 aaKnown RBP23.2■■□□□ 1.3
HSPG2-205ENST00000427897 CALCRLQ16602 461 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 ZNF710Q8N1W2 664 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 FIBCD1Q8N539 461 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 FBXO22Q8NEZ5 403 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 OSMRQ99650 979 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 CDHR5Q9HBB8 845 aa23.2■■□□□ 1.3
HSPG2-205ENST00000427897 NOC2LQ9Y3T9 749 aaKnown RBP23.2■■□□□ 1.3
HSPG2-205ENST00000427897 EPOPA6NHQ4 379 aa23.19■■□□□ 1.3
HSPG2-205ENST00000427897 DLL1O00548 723 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms