RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TARBP2Q15633 366 aaKnown RBP28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 FAM26DQ5JW98 314 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 ANO5Q75V66 913 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 ERMNQ8TAM6 284 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 RAB34Q9BZG1 259 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 ZSCAN16Q9H4T2 348 aaPredicted RBP28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 TMEM150BA6NC51 233 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 LYPLA2O95372 231 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 CXCL10P02778 98 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 TBC1D8BQ0IIM8 1120 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 MBTPS1Q14703 1052 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 MTERF2Q49AM1 385 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 HABP4Q5JVS0 413 aaKnown RBP28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 ZNF365Q70YC5 407 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 TPH2Q8IWU9 490 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 RNPC3Q96LT9 517 aaKnown RBP28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 LAMA3Q16787 3333 aa28.16■■■□□ 2.1
HERPUD2-205ENST00000427455 NBNO60934 754 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 FGBP02675 491 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 YWHABP31946 246 aaKnown RBP28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 MRPS6P82932 125 aaKnown RBP28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 GPNMBQ14956 572 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 HAUS3Q68CZ6 603 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 DTHD1Q6ZMT9 781 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 NME8Q8N427 588 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 IGSF22Q8N9C0 903 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 FTOQ9C0B1 505 aaKnown RBP eCLIP28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 TUFT1Q9NNX1 390 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 PPME1Q9Y570 386 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 SIP14410 1827 aa28.15■■■□□ 2.1
HERPUD2-205ENST00000427455 MGAT3Q09327 533 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 PDIA5Q14554 519 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 IER5Q5VY09 327 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 ARL6IP4Q66PJ3 421 aaKnown RBP28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 PLA2G4FQ68DD2 849 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 OTUD6AQ7L8S5 288 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 METTL13Q8N6R0 699 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 POLR3CQ9BUI4 534 aaPredicted RBP28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 MTIF3Q9H2K0 278 aaKnown RBP28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 CYP26B1Q9NR63 512 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 LRWD1Q9UFC0 647 aa28.14■■■□□ 2.1
HERPUD2-205ENST00000427455 ARID2Q68CP9 1835 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 M0QZ92 97 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 CHRNA1P02708 482 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 ACTN1P12814 892 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 KIAA0319LQ8IZA0 1049 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 LINC01465Q8N7H1 131 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 HERVK_113Q902F9 699 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 CEP89Q96ST8 783 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 STK24Q9Y6E0 443 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 CDY2AQ9Y6F7 541 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 TET1Q8NFU7 2136 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 EVPLQ92817 2033 aa28.13■■■□□ 2.09
HERPUD2-205ENST00000427455 SPATA31C1P0DKV0 1188 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 RPA1P27694 616 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 TMOD1P28289 359 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 SF3A1Q15459 793 aaKnown RBP28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 IL17AQ16552 155 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 EFCAB12Q6NXP0 572 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 OTOP2Q7RTS6 562 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 CATSPER3Q86XQ3 398 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 CEP170P1Q96L14 293 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 MAP7D2Q96T17 732 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 SH2D3AQ9BRG2 576 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 TRPV2Q9Y5S1 764 aa28.12■■■□□ 2.09
HERPUD2-205ENST00000427455 MED24O75448 989 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 CLCN3P51790 818 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 NPEPPSP55786 919 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 TMEM62Q0P6H9 643 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 LRIT3Q3SXY7 679 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 RASIP1Q5U651 963 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 FAM173BQ6P4H8 233 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 CNKSR3Q6P9H4 555 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 LRRC71Q8N4P6 559 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 JPH2Q9BR39 696 aaPredicted RBP28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 MYH15Q9Y2K3 1946 aa28.11■■■□□ 2.09
HERPUD2-205ENST00000427455 MAFO75444 373 aaPredicted RBP28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 ZSCAN22P10073 491 aaPredicted RBP28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 MUTP22033 750 aa28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 XKR9Q5GH70 373 aa28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 EXOC8Q8IYI6 725 aa28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 SUGCTQ9HAC7 445 aa28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 ANKEF1Q9NU02 776 aa28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 KDM3AQ9Y4C1 1321 aa28.1■■■□□ 2.09
HERPUD2-205ENST00000427455 IGKV6-21A0A0C4DH24 114 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 VWA3AA6NCI4 1184 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 BAIAP3O94812 1187 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 CCT6AP40227 531 aaKnown RBP28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 RFC5P40937 340 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 PLEKHG4Q58EX7 1191 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 SNX29Q8TEQ0 813 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 SLC7A3Q8WY07 619 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 CCDC43Q96MW1 224 aaKnown RBP28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 CELF4Q9BZC1 486 aaKnown RBP28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 AKT3Q9Y243 479 aa28.09■■■□□ 2.09
HERPUD2-205ENST00000427455 ZBTB39O15060 712 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 GHRP10912 638 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 POLGP54098 1239 aaPredicted RBP28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 FBXO47Q5MNV8 452 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 KRT79Q5XKE5 535 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms