RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 MTRQ99707 1265 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 DNAJC12Q9UKB3 198 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 DENND3A2RUS2 1198 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ZNF500O60304 480 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-207ENST00000426142 PSMA2P25787 234 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ABCD1P33897 745 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 COASYQ13057 564 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 MTMR2Q13614 643 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 R3HDM1Q15032 1099 aaKnown RBP8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ARMCX2Q7L311 632 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ATG9AQ7Z3C6 839 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ZNF667Q5HYK9 610 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 JADE1Q6IE81 842 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 CLEC10AQ8IUN9 316 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 TBC1D16Q8TBP0 767 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 CHMP6Q96FZ7 201 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 SPATA33Q96N06 139 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 ANGPTL3Q9Y5C1 460 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 BCORL1Q5H9F3 1711 aa8.54□□□□□ -1.04
CTNND1-207ENST00000426142 CLGNO14967 610 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 NR3C1P04150 777 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 SURF1Q15526 300 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 MAPK6Q16659 721 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 PPP6R3Q5H9R7 873 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 PRAMEF18Q5VWM3 479 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 FAM81BQ96LP2 452 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 IFT122Q9HBG6 1241 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 NGRNQ9NPE2 291 aaKnown RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 FBXO40Q9UH90 709 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 BAG2O95816 211 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 GUCY1A2P33402 732 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 PRCPP42785 496 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 ALCAMQ13740 583 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 FAM71BQ8TC56 605 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 PRPF31Q8WWY3 499 aaKnown RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 SAAL1Q96ER3 474 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 RUNDC3BQ96NL0 473 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 FAM114A2Q9NRY5 505 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 BARHL2Q9NY43 387 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 ABCA6Q8N139 1617 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 PLEKHG2Q9H7P9 1386 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 ZKSCAN8Q15776 578 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 MMEL1Q495T6 779 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 SCN4BQ8IWT1 228 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 GDAP1Q8TB36 358 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 POLR3FQ9H1D9 316 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 KIF28PB7ZC32 967 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 SESN3P58005 492 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 THOC5Q13769 683 aaKnown RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 TTLL4Q14679 1199 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 ZNF699Q32M78 642 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 TMEM270Q6UE05 265 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 LMNTD2Q8IXW0 634 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 LXNQ9BS40 222 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 VCXQ9H320 206 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 TBC1D22BQ9NU19 505 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 F5H423 210 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-207ENST00000426142 FCER1AP12319 257 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 MSH2P43246 934 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 EPHB1P54762 984 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 PPP4R3CPQ6ZMV5 832 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 TTC30AQ86WT1 665 aa8.53□□□□□ -1.04
CTNND1-207ENST00000426142 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 SPDYE2BA6NHP3 402 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 LDHAP00338 332 aaKnown RBP8.52□□□□□ -1.04
CTNND1-207ENST00000426142 SPDYE6P0CI01 402 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 PHKA2P46019 1235 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 GPC3P51654 580 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.04
CTNND1-207ENST00000426142 RCN2Q14257 317 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 ALKBH5Q6P6C2 394 aaKnown RBP8.52□□□□□ -1.04
CTNND1-207ENST00000426142 TOGARAM2Q6ZUX3 1019 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 GIMAP8Q8ND71 665 aaPredicted RBP8.52□□□□□ -1.04
CTNND1-207ENST00000426142 BCAS4Q8TDM0 211 aa8.52□□□□□ -1.04
CTNND1-207ENST00000426142 NSUN4Q96CB9 384 aaKnown RBP8.52□□□□□ -1.04
CTNND1-207ENST00000426142 GOLGA8CPA6NN73 597 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 IPO5O00410 1097 aaKnown RBP8.52□□□□□ -1.05
CTNND1-207ENST00000426142 GNAT1P11488 350 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 MAP7Q14244 749 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 TSNAXIP1Q2TAA8 658 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 PRR5LQ6MZQ0 368 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 RNF10Q8N5U6 811 aaKnown RBP8.52□□□□□ -1.05
CTNND1-207ENST00000426142 PRPF38AQ8NAV1 312 aaKnown RBP8.52□□□□□ -1.05
CTNND1-207ENST00000426142 GCNAQ96QF7 691 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 TTC36A6NLP5 189 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 CASQ2O14958 399 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-207ENST00000426142 RASSF2P50749 326 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 TEX2Q8IWB9 1127 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 MCPH1Q8NEM0 835 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 GANCQ8TET4 914 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 FAM167AQ96KS9 214 aa8.52□□□□□ -1.05
CTNND1-207ENST00000426142 SH2D3AQ9BRG2 576 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms