RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 RAD9AQ99638 391 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 OSBPL7Q9BZF2 842 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 NRBP2Q9NSY0 501 aa19.71■□□□□ 0.75
SLC6A1-202ENST00000425938 OATP04181 439 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 PRKCEQ02156 737 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 TAP1Q03518 808 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 MKRN4PQ13434 485 aaPredicted RBP19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 SAFBQ15424 915 aaKnown RBP eCLIP19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 KRT40Q6A162 431 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 FAM117BQ6P1L5 589 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 TSHZ1Q6ZSZ6 1077 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 DIS3L2Q8IYB7 885 aaKnown RBP19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 CELF4Q9BZC1 486 aaKnown RBP19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 SQORQ9Y6N5 450 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 TRANK1O15050 2925 aa19.7■□□□□ 0.74
SLC6A1-202ENST00000425938 ZBTB42B2RXF5 422 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 TBX3O15119 743 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 MAGEB2O15479 319 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 ST18O60284 1047 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 EARS2Q5JPH6 523 aaKnown RBP19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 METTL13Q8N6R0 699 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 PPM1EQ8WY54 764 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 TNFRSF25Q93038 417 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 KCNMB3Q9NPA1 279 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 INSL6Q9Y581 213 aa19.69■□□□□ 0.74
SLC6A1-202ENST00000425938 BTBD18B2RXH4 712 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 ZNF862O60290 1169 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 C22orf31O95567 290 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 UGCGQ16739 394 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 B3GNT9Q6UX72 402 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 KIAA0319LQ8IZA0 1049 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 FAM184AQ8NB25 1140 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 C8orf76Q96K31 380 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 COL25A1Q9BXS0 654 aaPredicted RBP19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 CERS4Q9HA82 394 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 GINS2Q9Y248 185 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 KDM3AQ9Y4C1 1321 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 TTC3P53804 2025 aa19.68■□□□□ 0.74
SLC6A1-202ENST00000425938 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 FAM205CA6NFA0 338 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 RBAK-RBAKDNI3L0D1 243 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 ARHGEF15O94989 841 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 BAG4O95429 457 aaKnown RBP19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 POU3F3P20264 500 aaPredicted RBP19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 TMOD1P28289 359 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 PAK2Q13177 524 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 PPP2R5CQ13362 524 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 SLFN12Q8IYM2 578 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 ARNTL2Q8WYA1 636 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 TOP1MTQ969P6 601 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 CUL9Q8IWT3 2517 aa19.67■□□□□ 0.74
SLC6A1-202ENST00000425938 LCHNA4D1U4 455 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 UPP2O95045 317 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 CD52P31358 61 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 CCDC85BQ15834 202 aaPredicted RBP19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 XKR3Q5GH77 459 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 POTEDQ86YR6 584 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 MAP7D2Q96T17 732 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 YME1L1Q96TA2 773 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 FTHL17Q9BXU8 183 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 AGO3Q9H9G7 860 aaKnown RBP19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 SEPT9Q9UHD8 586 aaPredicted RBP19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 VAV3Q9UKW4 847 aa19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 PRRC2BQ5JSZ5 2229 aaKnown RBP19.66■□□□□ 0.74
SLC6A1-202ENST00000425938 RFXAPO00287 272 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 GTPBP6O43824 516 aaPredicted RBP19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 DKC1O60832 514 aaKnown RBP eCLIP19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 PSMC5P62195 406 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 HTRA4P83105 476 aaPredicted RBP19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 TBC1D8BQ0IIM8 1120 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 ODR4Q5SWX8 454 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 EFCAB12Q6NXP0 572 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 HAS1Q92839 578 aa19.65■□□□□ 0.74
SLC6A1-202ENST00000425938 VCANP13611 3396 aa19.64■□□□□ 0.74
SLC6A1-202ENST00000425938 EPOPA6NHQ4 379 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 EML1O00423 815 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 QARSP47897 775 aaKnown RBP19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 CLCN3P51790 818 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 CALCRLQ16602 461 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 FAM43BQ6ZT52 329 aaPredicted RBP19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 ZNF710Q8N1W2 664 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 BANK1Q8NDB2 785 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 SYMPKQ92797 1274 aaKnown RBP19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 TGS1Q96RS0 853 aaKnown RBP19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 NIFKQ9BYG3 293 aaKnown RBP19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 TSPYL2Q9H2G4 693 aaPredicted RBP19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 PRDM6Q9NQX0 595 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 PADI3Q9ULW8 664 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 AKT3Q9Y243 479 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 MTCH2Q9Y6C9 303 aa19.64■□□□□ 0.73
SLC6A1-202ENST00000425938 LINC01553A4QN01 128 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 ENPP3O14638 875 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 NEMFO60524 1076 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 RPS6KA5O75582 802 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 VTNP04004 478 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 CRYBB1P53674 252 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms