RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SOWAHDA6NJG2 315 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 CETN3O15182 167 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 CCP110O43303 1012 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 ICAM3P32942 547 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 Q3C1V9 767 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 ZC2HC1CQ53FD0 456 aaPredicted RBP29.23■■■□□ 2.27
LDB1-202ENST00000425280 FAM178BQ8IXR5 827 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 FAM133AQ8N9E0 248 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 NUP58Q9BVL2 599 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 ANKEF1Q9NU02 776 aa29.23■■■□□ 2.27
LDB1-202ENST00000425280 UNCXA6NJT0 531 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 BACH1O14867 736 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 UTP14CQ5TAP6 766 aaKnown RBP29.22■■■□□ 2.27
LDB1-202ENST00000425280 TOGARAM2Q6ZUX3 1019 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 ZMYM2Q9UBW7 1377 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 EDNRBP24530 442 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 SP2Q02086 613 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 MTF1Q14872 753 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.22■■■□□ 2.274e-6■■■■□ 26
LDB1-202ENST00000425280 RETREG2Q8NC44 543 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 SH2D3AQ9BRG2 576 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 GABBR1Q9UBS5 961 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 PPP2R2CQ9Y2T4 447 aa29.22■■■□□ 2.27
LDB1-202ENST00000425280 LUC7L2Q9Y383 392 aaKnown RBP29.22■■■□□ 2.27
LDB1-202ENST00000425280 USO1O60763 962 aaKnown RBP29.21■■■□□ 2.27
LDB1-202ENST00000425280 MAEAQ7L5Y9 396 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 TRIM59Q8IWR1 403 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 CCDC43Q96MW1 224 aaKnown RBP29.21■■■□□ 2.27
LDB1-202ENST00000425280 SIK3Q9Y2K2 1263 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 UBE4BO95155 1302 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 TGFB1I1O43294 461 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 PSAPP07602 524 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 COPB2P35606 906 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 ACTR2P61160 394 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 PLA2G4FQ68DD2 849 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 RAD9BQ6WBX8 426 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 REXO1L1PQ8IX06 675 aa29.21■■■□□ 2.27
LDB1-202ENST00000425280 PCMTD1Q96MG8 357 aaPredicted RBP29.21■■■□□ 2.27
LDB1-202ENST00000425280 TRIM21P19474 475 aaKnown RBP29.2■■■□□ 2.26
LDB1-202ENST00000425280 XKR9Q5GH70 373 aa29.2■■■□□ 2.26
LDB1-202ENST00000425280 SEPT14Q6ZU15 432 aa29.2■■■□□ 2.26
LDB1-202ENST00000425280 TRMT1LQ7Z2T5 733 aaKnown RBP29.2■■■□□ 2.26
LDB1-202ENST00000425280 DNAJC7Q99615 494 aa29.2■■■□□ 2.26
LDB1-202ENST00000425280 ZSCAN12O43309 604 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 ZNF862O60290 1169 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 SORBS3O60504 671 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 NR3C1P04150 777 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 NPEPPSP55786 919 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 SP4Q02446 784 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 FIGNQ5HY92 759 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 ABHD15Q6UXT9 468 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 STXBP4Q6ZWJ1 553 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 ANO5Q75V66 913 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 KSR1Q8IVT5 923 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 OR8K1Q8NGG5 319 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 STRA6Q9BX79 667 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 SWSAP1Q6NVH7 229 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 ATP6V0A1Q93050 837 aa29.19■■■□□ 2.26
LDB1-202ENST00000425280 STBD1O95210 358 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 ERVK-24P63145 666 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 TMTC1Q8IUR5 882 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 TIPINQ9BVW5 301 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 IKZF4Q9H2S9 585 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 AGPAT5Q9NUQ2 364 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 PCDHB13Q9Y5F0 798 aa29.18■■■□□ 2.26
LDB1-202ENST00000425280 PPP1R37O75864 691 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 TERF1P54274 439 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 CCDC60Q8IWA6 550 aaPredicted RBP29.17■■■□□ 2.26
LDB1-202ENST00000425280 PRIMPOLQ96LW4 560 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 DESI2Q9BSY9 194 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 RRAGCQ9HB90 399 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 LARSQ9P2J5 1176 aaKnown RBP29.17■■■□□ 2.26
LDB1-202ENST00000425280 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.17■■■□□ 2.266e-17■□□□□ 8.1
LDB1-202ENST00000425280 LRRC37A2A6NM11 1700 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 A0A1W2PQJ5 194 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 CLIC2O15247 247 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 RPL13P26373 211 aaKnown RBP29.17■■■□□ 2.26
LDB1-202ENST00000425280 CYP26C1Q6V0L0 522 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 CYFIP1Q7L576 1253 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 FRMD5Q7Z6J6 570 aa29.17■■■□□ 2.26
LDB1-202ENST00000425280 DKC1O60832 514 aaKnown RBP eCLIP29.16■■■□□ 2.261e-9■□□□□ 8.9
LDB1-202ENST00000425280 PGK2P07205 417 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 CYP2C8P10632 490 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 PLS3P13797 630 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 MIS18BP1Q6P0N0 1132 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 CCDC155Q8N6L0 562 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 IQCDQ96DY2 449 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 SUPT20HL2P0C7V6 817 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 MAPTP10636 758 aaKnown RBP29.16■■■□□ 2.26
LDB1-202ENST00000425280 ERVK-9P63128 1117 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 ZBED6P86452 979 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 NFIL3Q16649 462 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 OTUD6AQ7L8S5 288 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 SMCR8Q8TEV9 937 aaPredicted RBP29.16■■■□□ 2.26
LDB1-202ENST00000425280 MS4A4AQ96JQ5 239 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 FGD4Q96M96 766 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 MMP19Q99542 508 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 PNMA3Q9UL41 463 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 FAM184BQ9ULE4 1060 aa29.16■■■□□ 2.26
LDB1-202ENST00000425280 K7ENM7 598 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms