RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MC4RP32245 332 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 MSX2P35548 267 aaPredicted RBP7.57□□□□□ -1.2
LINC01040-201ENST00000425048 MRE11P49959 708 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 GABREP78334 506 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 LACTBP83111 547 aaPredicted RBP7.57□□□□□ -1.2
LINC01040-201ENST00000425048 CD83Q01151 205 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 GRM7Q14831 915 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 SMN1Q16637 294 aaKnown RBP7.57□□□□□ -1.2
LINC01040-201ENST00000425048 FILIP1Q7Z7B0 1213 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 SGMS1Q86VZ5 419 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 HOMEZQ8IX15 550 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 UCKL1Q9NWZ5 548 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 PCDHA9Q9Y5H5 950 aa7.57□□□□□ -1.2
LINC01040-201ENST00000425048 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 C6orf222P0C671 652 aaPredicted RBP7.56□□□□□ -1.2
LINC01040-201ENST00000425048 DNM2P50570 870 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 MTERF2Q49AM1 385 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 ADGRE4PQ86SQ3 457 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 ZC3H7AQ8IWR0 971 aaKnown RBP7.56□□□□□ -1.2
LINC01040-201ENST00000425048 CKAP2LQ8IYA6 745 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
LINC01040-201ENST00000425048 OR10A5Q9H207 317 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 SMURF1Q9HCE7 757 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 TLR9Q9NR96 1032 aa7.56□□□□□ -1.2
LINC01040-201ENST00000425048 KCNK3O14649 394 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 MPIG6BO95866 241 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
LINC01040-201ENST00000425048 MOGSQ13724 837 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 TUBA3CQ13748 450 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 RASGRF1Q13972 1273 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 FOXB2Q5VYV0 432 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 KANK2Q63ZY3 851 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 TMEM200BQ69YZ2 307 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 TUBA3EQ6PEY2 450 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 NEU4Q8WWR8 484 aaPredicted RBP7.55□□□□□ -1.2
LINC01040-201ENST00000425048 CCDC113Q9H0I3 377 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 ZNF703Q9H7S9 590 aaPredicted RBP7.55□□□□□ -1.2
LINC01040-201ENST00000425048 PFDN2Q9UHV9 154 aa7.55□□□□□ -1.2
LINC01040-201ENST00000425048 PMS2P1A4D2B8 440 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 STK10O94804 968 aaKnown RBP7.54□□□□□ -1.2
LINC01040-201ENST00000425048 CRTAMO95727 393 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 APPP05067 770 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 INHBEP58166 350 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 LRSAM1Q6UWE0 723 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 GPR135Q8IZ08 494 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
LINC01040-201ENST00000425048 DHRS4Q9BTZ2 278 aa7.54□□□□□ -1.2
LINC01040-201ENST00000425048 MMEP08473 750 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 INHBCP55103 352 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 HGFACQ04756 655 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 SEC23AQ15436 765 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 GRAMD4Q6IC98 578 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 D2HGDHQ8N465 521 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 FAM184BQ9ULE4 1060 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 GIT1Q9Y2X7 761 aa7.53□□□□□ -1.2
LINC01040-201ENST00000425048 SCDO00767 359 aa7.52□□□□□ -1.21
LINC01040-201ENST00000425048 SLC26A4O43511 780 aa7.52□□□□□ -1.21
LINC01040-201ENST00000425048 SHCBP1Q8NEM2 672 aa7.52□□□□□ -1.21
LINC01040-201ENST00000425048 OR14K1Q8NGZ2 314 aa7.52□□□□□ -1.21
LINC01040-201ENST00000425048 A0A087X1B8 175 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 CYP27B1O15528 508 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 FAM153BP0C7A2 387 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 MAKP20794 623 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 LONRF2Q1L5Z9 754 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 HIPK4Q8NE63 616 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 ASB15Q8WXK1 588 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 GBP4Q96PP9 640 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 MMRN2Q9H8L6 949 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 KCNH7Q9NS40 1196 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 PPP1R1BQ9UD71 204 aaPredicted RBP7.51□□□□□ -1.21
LINC01040-201ENST00000425048 ASB1Q9Y576 335 aa7.51□□□□□ -1.21
LINC01040-201ENST00000425048 PRAMEF22A3QJZ6 481 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 ADH4P08319 380 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 STAT5BP51692 787 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 FNDC7Q5VTL7 733 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 CALML6Q8TD86 181 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 ZNF483Q8TF39 744 aaPredicted RBP7.5□□□□□ -1.21
LINC01040-201ENST00000425048 TMEM176AQ96HP8 235 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 EXOC2Q96KP1 924 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 MPHOSPH9Q99550 1183 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 AGO3Q9H9G7 860 aaKnown RBP7.5□□□□□ -1.21
LINC01040-201ENST00000425048 PARPBPQ9NWS1 579 aa7.5□□□□□ -1.21
LINC01040-201ENST00000425048 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 CAPN14A8MX76 684 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 FOXP2O15409 715 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 DIAPH1O60610 1272 aaKnown RBP7.49□□□□□ -1.21
LINC01040-201ENST00000425048 EFCAB14O75071 495 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 TMPRSS6Q8IU80 811 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 NOSTRINQ8IVI9 506 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 CISD2Q8N5K1 135 aaKnown RBP7.49□□□□□ -1.21
LINC01040-201ENST00000425048 KRTAP9-8Q9BYQ0 159 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 CEP72Q9P209 647 aa7.49□□□□□ -1.21
LINC01040-201ENST00000425048 MRPS23Q9Y3D9 190 aaKnown RBP7.49□□□□□ -1.21
LINC01040-201ENST00000425048 GOLGA6L22H0YM25 854 aa7.48□□□□□ -1.21
LINC01040-201ENST00000425048 APEX1P27695 318 aaKnown RBP7.48□□□□□ -1.21
LINC01040-201ENST00000425048 MAP3K12Q12852 859 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms