RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MAMDC4Q6UXC1 1216 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 C4orf19Q8IY42 314 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 PPP1R13BQ96KQ4 1090 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 REEP2Q9BRK0 252 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 SYNGAP1Q96PV0 1343 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 LYPLA2O95372 231 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 SNAI1O95863 264 aaPredicted RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 TXNP10599 105 aaKnown RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 YWHABP31946 246 aaKnown RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 STX17P56962 302 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 COASYQ13057 564 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 MAP2K5Q13163 448 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 CCDC62Q6P9F0 684 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 CCDC60Q8IWA6 550 aaPredicted RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 KIF18AQ8NI77 898 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 CTAGE1Q96RT6 745 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 MLXIPQ9HAP2 919 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 SAMSN1Q9NSI8 373 aaKnown RBP16.61■□□□□ 0.25
CALD1-206ENST00000424922 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 ARHGEF35A5YM69 484 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 TMEM150BA6NC51 233 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 BACH1O14867 736 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 EHHADHQ08426 723 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 TMEM63BQ5T3F8 832 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
CALD1-206ENST00000424922 METTL7BQ6UX53 244 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 CCDC65Q8IXS2 484 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ADSSL1Q8N142 457 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 SCFD2Q8WU76 684 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 SH2D3AQ9BRG2 576 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ZHX3Q9H4I2 956 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 VTA1Q9NP79 307 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ARHGAP6O43182 974 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ATG7O95352 703 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
CALD1-206ENST00000424922 TAPT1Q6NXT6 567 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 APTXQ7Z2E3 356 aaKnown RBP16.6■□□□□ 0.25
CALD1-206ENST00000424922 KIAA0895Q8NCT3 520 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 ANKRD7Q92527 254 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 COPS5Q92905 334 aa16.6■□□□□ 0.25
CALD1-206ENST00000424922 DBR1Q9UK59 544 aaKnown RBP16.6■□□□□ 0.25
CALD1-206ENST00000424922 TNPO2O14787 897 aaKnown RBP16.59■□□□□ 0.25
CALD1-206ENST00000424922 ZNF862O60290 1169 aa16.59■□□□□ 0.25
CALD1-206ENST00000424922 RARRES1P49788 294 aa16.59■□□□□ 0.25
CALD1-206ENST00000424922 STIM1Q13586 685 aa16.59■□□□□ 0.25
CALD1-206ENST00000424922 HERC4Q5GLZ8 1057 aaPredicted RBP16.59■□□□□ 0.25
CALD1-206ENST00000424922 TMEM139Q8IV31 216 aa16.59■□□□□ 0.25
CALD1-206ENST00000424922 DHX37Q8IY37 1157 aaKnown RBP16.59■□□□□ 0.25
CALD1-206ENST00000424922 GTPBP4Q9BZE4 634 aaKnown RBP16.59■□□□□ 0.25
CALD1-206ENST00000424922 TBC1D7Q9P0N9 293 aa16.59■□□□□ 0.25
CALD1-206ENST00000424922 RWDD2AQ9UIY3 292 aa16.59■□□□□ 0.25
CALD1-206ENST00000424922 GSTTP1A0A1W2PQM5 241 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 FRMD3A2A2Y4 597 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 RSPH10B2B2RC85 870 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 RSPH10BP0C881 870 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 CTGFP29279 349 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 PAK1Q13153 545 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 PSMD2Q13200 908 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 PADI6Q6TGC4 694 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 NELFBQ8WX92 580 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 CCDC43Q96MW1 224 aaKnown RBP16.58■□□□□ 0.25
CALD1-206ENST00000424922 KATNBL1Q9H079 304 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 ZNF302Q9NR11 478 aa16.58■□□□□ 0.25
CALD1-206ENST00000424922 STX10O60499 249 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
CALD1-206ENST00000424922 CYP2B6P20813 491 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 HSDL1Q3SXM5 330 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 PLA2G4FQ68DD2 849 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 ANO5Q75V66 913 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
CALD1-206ENST00000424922 USP6NLQ92738 828 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 KCND2Q9NZV8 630 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.24
CALD1-206ENST00000424922 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 TBCAO75347 108 aaKnown RBP16.57■□□□□ 0.24
CALD1-206ENST00000424922 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 CHRM1P11229 460 aaPredicted RBP16.57■□□□□ 0.24
CALD1-206ENST00000424922 TCF7P36402 384 aaPredicted RBP16.57■□□□□ 0.24
CALD1-206ENST00000424922 ADCYAP1R1P41586 468 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 NPEPPSP55786 919 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 HTRA3P83110 453 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 PRKCEQ02156 737 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 FAM26FQ5R3K3 315 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 TC2NQ8N9U0 490 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 SEPT1Q8WYJ6 367 aa16.57■□□□□ 0.24
CALD1-206ENST00000424922 TSC1Q92574 1164 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms