RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-204ENST00000422869 RIPK1Q13546 671 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 DCAF12L1Q5VU92 463 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 HOOK3Q86VS8 718 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 DZIP1Q86YF9 867 aaKnown RBP13.82□□□□□ -0.2
CTCFL-204ENST00000422869 EGFL6Q8IUX8 553 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 LRRC34Q8IZ02 419 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 HOOK2Q96ED9 719 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 PGM2Q96G03 612 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 KCNMB3Q9NPA1 279 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 TTC7AQ9ULT0 858 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-204ENST00000422869 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
CTCFL-204ENST00000422869 ARFGEF1Q9Y6D6 1849 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 FLOT1O75955 427 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 HAS1Q92839 578 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 AFF2P51816 1311 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
CTCFL-204ENST00000422869 BUB1BO60566 1050 aaPredicted RBP13.81□□□□□ -0.2
CTCFL-204ENST00000422869 NEBLO76041 1014 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 SLC8A3P57103 927 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 PTENP60484 403 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 DUPD1Q68J44 220 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 NSMCE1Q8WV22 266 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 RNF25Q96BH1 459 aaPredicted RBP13.81□□□□□ -0.2
CTCFL-204ENST00000422869 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 UBA5Q9GZZ9 404 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 PABPC3Q9H361 631 aaKnown RBP13.81□□□□□ -0.2
CTCFL-204ENST00000422869 EMILIN3Q9NT22 766 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 AGAP1Q9UPQ3 857 aa13.81□□□□□ -0.2
CTCFL-204ENST00000422869 E9PMD0 336 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 DDX3XO00571 662 aaKnown RBP eCLIP13.8□□□□□ -0.28e-11■■■■□ 20.5
CTCFL-204ENST00000422869 CLTAP09496 248 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 NR2F2P24468 414 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 COPB2P35606 906 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 KLRC3Q07444 240 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 MYO1EQ12965 1108 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 NAA25Q14CX7 972 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 TXNRD3Q86VQ6 643 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 SYCE1Q8N0S2 351 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 TBC1D22AQ8WUA7 517 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 LMBR1Q8WVP7 490 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 TRIM6Q9C030 488 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 L3MBTL1Q9Y468 752 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 H2AFZP0C0S5 128 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 PMS2P54278 862 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 JAM2P57087 298 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 IFI35P80217 286 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 UBAP2Q5T6F2 1119 aaKnown RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 H2AFVQ71UI9 128 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 TRPM8Q7Z2W7 1104 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 OLIG1Q8TAK6 271 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 COA7Q96BR5 231 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 PRMT1Q99873 361 aaKnown RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 RAB17Q9H0T7 212 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 CCDC134Q9H6E4 229 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 OSGEPQ9NPF4 335 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 ABCF3Q9NUQ8 709 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 SPDYE3A6NKU9 549 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 SMARCA1P28370 1054 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 CASP5P51878 434 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 NPEPPSP55786 919 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 DR1Q01658 176 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 FAM133BQ5BKY9 247 aaKnown RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 HERC4Q5GLZ8 1057 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 HYIQ5T013 277 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 PNMA8AQ86V59 439 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 CCDC65Q8IXS2 484 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 NEK9Q8TD19 979 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 RSRC1Q96IZ7 334 aaKnown RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 ERP44Q9BS26 406 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 SIX2Q9NPC8 291 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 SAP30BPQ9UHR5 308 aaKnown RBP13.8□□□□□ -0.2
CTCFL-204ENST00000422869 C15orf41Q9Y2V0 281 aa13.8□□□□□ -0.2
CTCFL-204ENST00000422869 CETN3O15182 167 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 DDX3YO15523 660 aaKnown RBP13.79□□□□□ -0.2
CTCFL-204ENST00000422869 ADCY7P51828 1080 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 ZNF268Q14587 947 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-204ENST00000422869 ZDHHC24Q6UX98 284 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 GLG1Q92896 1179 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 THOC1Q96FV9 657 aaKnown RBP13.79□□□□□ -0.2
CTCFL-204ENST00000422869 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-204ENST00000422869 AZI2Q9H6S1 392 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-204ENST00000422869 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 USP17L5A8MUK1 530 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms