RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 PSMC5P62195 406 aa16■□□□□ 0.15
AP000550.1-201ENST00000420508 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
AP000550.1-201ENST00000420508 XRRA1Q6P2D8 792 aa16■□□□□ 0.15
AP000550.1-201ENST00000420508 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L15C9J2P7 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L13C9JLJ4 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L11C9JVI0 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L18D6R9N7 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L22D6RA61 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L17D6RBQ6 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L19D6RCP7 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L20D6RJB6 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 TBXAS1P24557 533 aaPredicted RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 GPC5P78333 572 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L24Q0WX57 530 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 C6orf118Q5T5N4 469 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP17L6PQ6QN14 398 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 TC2NQ8N9U0 490 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 ERGIC2Q96RQ1 377 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 FMO2Q99518 471 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 HOXA13P31271 388 aaPredicted RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 IREB2P48200 963 aaKnown RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 ANKRD40Q6AI12 368 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 PAXIP1Q6ZW49 1069 aaPredicted RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 EEF2KMTQ96G04 330 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 CFAP57Q96MR6 1250 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 OSBPL9Q96SU4 736 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 ZNF148Q9UQR1 794 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 PALM3A6NDB9 673 aaPredicted RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 IL9RQ01113 521 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 TERF2Q15554 542 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 NTRK3Q16288 839 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 CEP57Q86XR8 500 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 ZNF354CQ86Y25 554 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 NSMCE1Q8WV22 266 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 GDAP1L1Q96MZ0 367 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 PAGR1Q9BTK6 254 aa15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 PPANQ9NQ55 473 aaKnown RBP15.99■□□□□ 0.15
AP000550.1-201ENST00000420508 USP27XA6NNY8 438 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 TLR3O15455 904 aaKnown RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 RAD17O75943 681 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 DPF2Q92785 391 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 EIF2AK1Q9BQI3 630 aaKnown RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ARHGEF37A1IGU5 675 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 EVI5O60447 810 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 PALMO75781 387 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ZNF277Q9NRM2 450 aaPredicted RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 NFAT5O94916 1531 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 SUN1O94901 812 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 CASP1P29466 404 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 DNAJC24Q6P3W2 148 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ARHGEF18Q6ZSZ5 1173 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 EHD4Q9H223 541 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ACTR5Q9H9F9 607 aaPredicted RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ATRNO75882 1429 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 PSMD14O00487 310 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 CCDC117Q8IWD4 279 aaPredicted RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 ANKS1AQ92625 1134 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 HVCN1Q96D96 273 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 RBM41Q96IZ5 413 aaKnown RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 TDRD3Q9H7E2 651 aaKnown RBP15.98■□□□□ 0.15
AP000550.1-201ENST00000420508 P4HA2O15460 535 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 CDK17Q00537 523 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 TNFAIP2Q03169 654 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 STXBP2Q15833 593 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 MAP7D1Q3KQU3 841 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 ANKRD20A3Q5VUR7 823 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 GPIHBP1Q8IV16 184 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 RNF34Q969K3 372 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 DYDC2Q96IM9 177 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 INTS9Q9NV88 658 aaKnown RBP15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 SLC8A1P32418 973 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 UBXN2AP68543 259 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 TSNAXIP1Q2TAA8 658 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 CCDC197Q8NCU1 140 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 MAD2L2Q9UI95 211 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 PNMA3Q9UL41 463 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 NR1H3Q13133 447 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 KYAT1Q16773 422 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 RFFLQ8WZ73 363 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 SUGCTQ9HAC7 445 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 FAM237AA0A1B0GTK4 181 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 PPP1R3GB7ZBB8 358 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 K7ERI5 159 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 CHGBP05060 677 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 DHX9Q08211 1270 aaKnown RBP15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 KRT39Q6A163 491 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 PDXDC2PQ6P474 469 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 SPATA24Q86W54 205 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 LMNTD2Q8IXW0 634 aa15.97■□□□□ 0.15
AP000550.1-201ENST00000420508 TTC13Q8NBP0 860 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms