RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-204ENST00000420101 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
SEMA4D-204ENST00000420101 A0A0U1RQJ8 604 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 PPP1R12AO14974 1030 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 RPN1P04843 607 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 STAT3P40763 770 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 PPATQ06203 517 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ACTN3Q08043 901 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 SH3D19Q5HYK7 790 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 KLHL10Q6JEL2 608 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ERO1BQ86YB8 467 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ERMNQ8TAM6 284 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ATRIPQ8WXE1 791 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 FAM20AQ96MK3 541 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 PURBQ96QR8 312 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 MTRQ99707 1265 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 RNF14Q9UBS8 474 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 CAPN11Q9UMQ6 739 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 LUC7L2Q9Y383 392 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 IRF6O14896 467 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 MSH4O15457 936 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ATP1A1P05023 1023 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 NAP1L1P55209 391 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 GRB10Q13322 594 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 MEA1Q16626 185 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 MAP1SQ66K74 1059 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ARFGAP2Q8N6H7 521 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 TRIM58Q8NG06 486 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 JPH2Q9BR39 696 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 KLC4Q9NSK0 619 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 STK17AQ9UEE5 414 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 MYH7BA7E2Y1 1941 aa16.19■□□□□ 0.18
SEMA4D-204ENST00000420101 POTECB2RU33 542 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 RASSF9O75901 435 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 MYL1P05976 194 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 ASIC1P78348 528 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 TCP11X2Q5H9J9 407 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 TREML2Q5T2D2 321 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 HAUS3Q68CZ6 603 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 MREGQ8N565 214 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 RIN2Q8WYP3 895 aaPredicted RBP16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 MIEF2Q96C03 454 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 KBTBD4Q9NVX7 518 aa16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
SEMA4D-204ENST00000420101 TCP1P17987 556 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 EEF1GP26641 437 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SLC8A1P32418 973 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 OAZ1P54368 228 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 TMEM132BQ14DG7 1078 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 CEP55Q53EZ4 464 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SND1Q7KZF4 910 aaKnown RBP eCLIP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 KIAA1328Q86T90 577 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SMYD4Q8IYR2 804 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SAMD3Q8N6K7 520 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 LARP4BQ92615 738 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 LENG9Q96B70 501 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 PNMA5Q96PV4 448 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 MAP3K20Q9NYL2 800 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 RIPK3Q9Y572 518 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SPDYE16A6NNV3 312 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 POTEIP0CG38 1075 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 MYCLP12524 364 aaPredicted RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 CCDC40Q4G0X9 1142 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 ARHGEF16Q5VV41 709 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 SLC30A10Q6XR72 485 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 OPTNQ96CV9 577 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 TEX13BQ9BXU2 312 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 RRAGCQ9HB90 399 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 COL20A1Q9P218 1284 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 KIAA1024Q9UPX6 916 aa16.17■□□□□ 0.18
SEMA4D-204ENST00000420101 IGLV3-22A0A075B6J6 115 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 A0A1B0GUA9 196 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 SPDYE5A6NIY4 337 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 HMGB1P1B2RPK0 211 aaPredicted RBP16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 CHMP2AO43633 222 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 GAS7O60861 476 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 VAV2P52735 878 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 PAK1Q13153 545 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 BAATQ14032 418 aaPredicted RBP16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 EIF1ADQ8N9N8 165 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 LRRC15Q8TF66 581 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 RAD54LQ92698 747 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms