RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 SIPA1L1O43166 1804 aa10.06□□□□□ -0.8
USP8-203ENST00000419830 EP400Q96L91 3159 aa10.06□□□□□ -0.8
USP8-203ENST00000419830 SMCHD1A6NHR9 2005 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 HLA-DOAP06340 250 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 ITGA4P13612 1032 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 SREBF1P36956 1147 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 MMP14P50281 582 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 TADA2BQ86TJ2 420 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 TAF4BQ92750 862 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 ATP6V1G3Q96LB4 118 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 TYW1Q9NV66 732 aaKnown RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 RGL1Q9NZL6 768 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 PLAAQ9Y263 795 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 CLIC2O15247 247 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 SART1O43290 800 aaKnown RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 CIITAP33076 1130 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 LSP1P33241 339 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 FLT3P36888 993 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 JAG1P78504 1218 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 CYP4A11Q02928 519 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 TCP10Q12799 353 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 TTC31Q49AM3 519 aaPredicted RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 DCAF17Q5H9S7 520 aaPredicted RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 SLC30A10Q6XR72 485 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 RASGEF1CQ8N431 466 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 TEKT1Q969V4 418 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 ZC3H12CQ9C0D7 883 aaKnown RBP10.05□□□□□ -0.8
USP8-203ENST00000419830 BHMT2Q9H2M3 363 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 USP21Q9UK80 565 aa10.05□□□□□ -0.8
USP8-203ENST00000419830 KIF13BQ9NQT8 1826 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 A6NNZ2 444 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 F5H6K3 240 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 SLC16A3O15427 465 aaKnown RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 CALUO43852 315 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 ZEB2O60315 1214 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 HSD17B3P37058 310 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 CRKP46108 304 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 KLRC3Q07444 240 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 TUBB8Q3ZCM7 444 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 CERKLQ49MI3 558 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 NT5DC3Q86UY8 548 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 ERMNQ8TAM6 284 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 LNX1Q8TBB1 728 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP8-203ENST00000419830 KAT2BQ92831 832 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP8-203ENST00000419830 SYT11Q9BT88 431 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 AMNQ9BXJ7 453 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 DDX47Q9H0S4 455 aaKnown RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 EFCC1Q9HA90 598 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 TMBIM4Q9HC24 238 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 ZMYM2Q9UBW7 1377 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 A0A0A6YYK5 440 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 SHTN1A0MZ66 631 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 ZBTB39O15060 712 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 NR1D1P20393 614 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 ANXA13P27216 316 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 HOXA13P31271 388 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 LIG3P49916 1009 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 PTGISQ16647 500 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 USH1GQ495M9 461 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 CEP85LQ5SZL2 805 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 TATDN1Q6P1N9 297 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 OR2W6PQ8NHA6 318 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 ZDHHC15Q96MV8 337 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 EIF2AK1Q9BQI3 630 aaKnown RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 EPN3Q9H201 632 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 METTL14Q9HCE5 456 aaKnown RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 GCNT4Q9P109 453 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 SUCLA2Q9P2R7 463 aaPredicted RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 NOC2LQ9Y3T9 749 aaKnown RBP10.04□□□□□ -0.8
USP8-203ENST00000419830 NR2E1Q9Y466 385 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
USP8-203ENST00000419830 ATP8B3O60423 1300 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 IGLV3-22A0A075B6J6 115 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
USP8-203ENST00000419830 PGRMC1O00264 195 aaKnown RBP10.03□□□□□ -0.8
USP8-203ENST00000419830 NDUFAB1O14561 156 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 FLOT1O75955 427 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 GFPT2O94808 682 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 GCNT3O95395 438 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 EYA4O95677 639 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 H2AFZP0C0S5 128 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 MDH1P40925 334 aaKnown RBP10.03□□□□□ -0.8
USP8-203ENST00000419830 SEC24CP53992 1094 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 GALCP54803 685 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 POU5F1Q01860 360 aaKnown RBP10.03□□□□□ -0.8
USP8-203ENST00000419830 CUL1Q13616 776 aa10.03□□□□□ -0.8
USP8-203ENST00000419830 IFI16Q16666 785 aaKnown RBP10.03□□□□□ -0.8
USP8-203ENST00000419830 ZC2HC1CQ53FD0 456 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms