RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 TRIM64CA6NLI5 447 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 AREL1O15033 823 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 RTN3O95197 1032 aaPredicted RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 ABCB4P21439 1286 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 SCRN3Q0VDG4 424 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 PTK2BQ14289 1009 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 SH2D3CQ8N5H7 860 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 ERP27Q96DN0 273 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 LSM14BQ9BX40 385 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 FANCEQ9HB96 536 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 TOM1L1O75674 476 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 GSNP06396 782 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 CCT3P49368 545 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 GET4Q7L5D6 327 aaPredicted RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 SFR1Q86XK3 245 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 SRRM1Q8IYB3 904 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 KIF2BQ8N4N8 673 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 NACA2Q9H009 215 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 RNPEPQ9H4A4 650 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 RTEL1Q9NZ71 1219 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 PCDHGA3Q9Y5H0 932 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 SYNMO15061 1565 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 PIK3R4Q99570 1358 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 TCP11X1B4DZS4 312 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 MATN2O00339 956 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 NSFP46459 744 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 PMS2P54278 862 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 CAV1Q03135 178 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 ZNF174Q15697 407 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 GSPT2Q8IYD1 628 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 FBXL13Q8NEE6 735 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 CAPSLQ8WWF8 208 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 PPP2R3CQ969Q6 453 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 NAP1L4Q99733 375 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 LRWD1Q9UFC0 647 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 SOS1Q07889 1333 aaPredicted RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 SMIM31A0A1B0GVY4 71 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 GSTA4O15217 222 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 ATP9AO75110 1047 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 IL10P22301 178 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 CLK1P49759 484 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 BFSP1Q12934 665 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 LRRC36Q1X8D7 754 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 KLHL12Q53G59 568 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 MRPL50Q8N5N7 158 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 SCYL1Q96KG9 808 aa11.01□□□□□ -0.65
SATB1-204ENST00000417717 UBE2OQ9C0C9 1292 aaKnown RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 CLEC4MQ9H2X3 399 aaPredicted RBP11.01□□□□□ -0.65
SATB1-204ENST00000417717 RGS20O76081 388 aa11□□□□□ -0.65
SATB1-204ENST00000417717 KRT31Q15323 416 aa11□□□□□ -0.65
SATB1-204ENST00000417717 YTHDF3Q7Z739 585 aaKnown RBP11□□□□□ -0.65
SATB1-204ENST00000417717 FUKQ8N0W3 1084 aa11□□□□□ -0.65
SATB1-204ENST00000417717 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
SATB1-204ENST00000417717 TMEM87BQ96K49 555 aa11□□□□□ -0.65
SATB1-204ENST00000417717 HDAC6Q9UBN7 1215 aa11□□□□□ -0.65
SATB1-204ENST00000417717 RCOR1Q9UKL0 485 aa11□□□□□ -0.65
SATB1-204ENST00000417717 ADGRG1Q9Y653 693 aa11□□□□□ -0.65
SATB1-204ENST00000417717 KDM5AP29375 1690 aaKnown RBP11□□□□□ -0.65
SATB1-204ENST00000417717 MAP3K4Q9Y6R4 1608 aa11□□□□□ -0.65
SATB1-204ENST00000417717 SEMA3EO15041 775 aa11□□□□□ -0.65
SATB1-204ENST00000417717 KRT37O76014 449 aa11□□□□□ -0.65
SATB1-204ENST00000417717 OATP04181 439 aa11□□□□□ -0.65
SATB1-204ENST00000417717 ME3Q16798 604 aa11□□□□□ -0.65
SATB1-204ENST00000417717 KRT40Q6A162 431 aa11□□□□□ -0.65
SATB1-204ENST00000417717 KCNF1Q9H3M0 494 aa11□□□□□ -0.65
SATB1-204ENST00000417717 NOL6Q9H6R4 1146 aaKnown RBP11□□□□□ -0.65
SATB1-204ENST00000417717 PLGRKTQ9HBL7 147 aa11□□□□□ -0.65
SATB1-204ENST00000417717 PRPF6O94906 941 aaKnown RBP11□□□□□ -0.65
SATB1-204ENST00000417717 MOCS3O95396 460 aa11□□□□□ -0.65
SATB1-204ENST00000417717 ACSL3O95573 720 aa11□□□□□ -0.65
SATB1-204ENST00000417717 CCDC166P0CW27 439 aa11□□□□□ -0.65
SATB1-204ENST00000417717 ZNF18P17022 549 aa11□□□□□ -0.65
SATB1-204ENST00000417717 CCNHP51946 323 aaPredicted RBP11□□□□□ -0.65
SATB1-204ENST00000417717 PBXIP1Q96AQ6 731 aa11□□□□□ -0.65
SATB1-204ENST00000417717 FNBP1Q96RU3 617 aa11□□□□□ -0.65
SATB1-204ENST00000417717 CIDEBQ9UHD4 219 aa11□□□□□ -0.65
SATB1-204ENST00000417717 DSEQ9UL01 958 aa11□□□□□ -0.65
SATB1-204ENST00000417717 ITM2BQ9Y287 266 aa11□□□□□ -0.65
SATB1-204ENST00000417717 USTQ9Y2C2 406 aa11□□□□□ -0.65
SATB1-204ENST00000417717 CLTCL1P53675 1640 aa11□□□□□ -0.65
SATB1-204ENST00000417717 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 RPS6KA5O75582 802 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 KPNA2P52292 529 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 PRAMEP78395 509 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 SGO2Q562F6 1265 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 TTC38Q5R3I4 469 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 ZCCHC7Q8N3Z6 543 aaKnown RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 LENG1Q96BZ8 264 aaPredicted RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 HDAC11Q96DB2 347 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 TUBGCP2Q9BSJ2 902 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 DBF4Q9UBU7 674 aaPredicted RBP10.99□□□□□ -0.65
SATB1-204ENST00000417717 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
SATB1-204ENST00000417717 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms