RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	NR5A1	Q13285	461 aa		18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	TRIM29	Q14134	588 aa		18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	ADGRE1	Q14246	886 aa		18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	MIER3	Q7Z3K6	550 aa		18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	KIAA0319L	Q8IZA0	1049 aa		18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	TNFRSF25	Q93038	417 aa		18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	CELF4	Q9BZC1	486 aa	Known RBP	18.46	■□□□□ 0.54
DDR1-231	ENST00000417521	TRIP12	Q14669	1992 aa	Predicted RBP	18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	RBAK-RBAKDN	I3L0D1	243 aa		18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	TBX3	O15119	743 aa		18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	MAGEB2	O15479	319 aa		18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	CCNT1	O60563	726 aa	Known RBP	18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	ARHGEF15	O94989	841 aa		18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	C22orf31	O95567	290 aa		18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	EARS2	Q5JPH6	523 aa	Known RBP	18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	HSCB	Q8IWL3	235 aa		18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	AGO3	Q9H9G7	860 aa	Known RBP	18.45	■□□□□ 0.54
DDR1-231	ENST00000417521	LCHN	A4D1U4	455 aa		18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	OAT	P04181	439 aa		18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	HTRA4	P83105	476 aa	Predicted RBP	18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	TMEM62	Q0P6H9	643 aa		18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	CUL4A	Q13619	759 aa		18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	KRT40	Q6A162	431 aa		18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	FAM117B	Q6P1L5	589 aa		18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	DIS3L2	Q8IYB7	885 aa	Known RBP	18.44	■□□□□ 0.54
DDR1-231	ENST00000417521	BTBD18	B2RXH4	712 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	ENPP3	O14638	875 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	CD52	P31358	61 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	PRKCE	Q02156	737 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	UGCG	Q16739	394 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	FTHL17	Q9BXU8	183 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	CERS4	Q9HA82	394 aa		18.43	■□□□□ 0.54
DDR1-231	ENST00000417521	POU3F3	P20264	500 aa	Predicted RBP	18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	IGFBP4	P22692	258 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	FOSB	P53539	338 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	HMGN5	P82970	282 aa	Known RBP	18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	PPP2R5C	Q13362	524 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	XKR3	Q5GH77	459 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	SP7	Q8TDD2	431 aa	Predicted RBP	18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	ARNTL2	Q8WYA1	636 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	HAS1	Q92839	578 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	PADI3	Q9ULW8	664 aa		18.42	■□□□□ 0.54
DDR1-231	ENST00000417521	LINC01553	A4QN01	128 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	FAM205C	A6NFA0	338 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	MARCH6	O60337	910 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	TMOD1	P28289	359 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	ERVK-21	P61565	698 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	SLFN12	Q8IYM2	578 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	ZNF710	Q8N1W2	664 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	METTL13	Q8N6R0	699 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	TGS1	Q96RS0	853 aa	Known RBP	18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	NIFK	Q9BYG3	293 aa	Known RBP	18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	FOXD4L1	Q9NU39	408 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	VAV3	Q9UKW4	847 aa		18.41	■□□□□ 0.54
DDR1-231	ENST00000417521	CHD7	Q9P2D1	2997 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	UPP2	O95045	317 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	BAG4	O95429	457 aa	Known RBP	18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	PSMC5	P62195	406 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	PAK2	Q13177	524 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	SAFB	Q15424	915 aa	Known RBP eCLIP	18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	TARBP2	Q15633	366 aa	Known RBP	18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	ODR4	Q5SWX8	454 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	EFCAB12	Q6NXP0	572 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	POTED	Q86YR6	584 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	LINC01465	Q8N7H1	131 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	YME1L1	Q96TA2	773 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	CDHR5	Q9HBB8	845 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	GINS2	Q9Y248	185 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	UNC80	Q8N2C7	3258 aa		18.4	■□□□□ 0.54
DDR1-231	ENST00000417521	EPOP	A6NHQ4	379 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	RFXAP	O00287	272 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	EML1	O00423	815 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	DKC1	O60832	514 aa	Known RBP eCLIP	18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	STBD1	O95210	358 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	CRYBB1	P53674	252 aa	Predicted RBP	18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	TBC1D8B	Q0IIM8	1120 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	SPRED2	Q7Z698	418 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	FAM184A	Q8NB25	1140 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	C8orf76	Q96K31	380 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	MAP7D2	Q96T17	732 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	SMC3	Q9UQE7	1217 aa		18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.39	■□□□□ 0.54
DDR1-231	ENST00000417521	GTPBP6	O43824	516 aa	Predicted RBP	18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	GPR32	O75388	356 aa		18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	RPS6KA5	O75582	802 aa		18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	P4HB	P07237	508 aa	Known RBP	18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	GJB2	P29033	226 aa		18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	QARS	P47897	775 aa	Known RBP	18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	CLCN3	P51790	818 aa		18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	EPHA7	Q15375	998 aa		18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	KIZ	Q2M2Z5	673 aa		18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	NOC2L	Q9Y3T9	749 aa	Known RBP	18.39	■□□□□ 0.53
DDR1-231	ENST00000417521	GPR182	O15218	404 aa		18.38	■□□□□ 0.53
DDR1-231	ENST00000417521	VTN	P04004	478 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms