RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 KRT4P19013 534 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 C21orf58P58505 322 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 PPP2R2AP63151 447 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 SMAD3P84022 425 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 MAP3K12Q12852 859 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 RIN1Q13671 783 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 CD244Q9BZW8 370 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 PRKAG3Q9UGI9 489 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 ATP23Q9Y6H3 246 aa4.89□□□□□ -1.63
TRAPPC13-203ENST00000415825 PRAMEF25A6NGN4 478 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 ACOT7O00154 380 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 MSCO60682 206 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 ATF4P18848 351 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 GPR85P60893 370 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 IL13RA1P78552 427 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 MBNL2Q5VZF2 373 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 LARP4Q71RC2 724 aaKnown RBP eCLIP4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 LPPQ93052 612 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 SGSM3Q96HU1 749 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 FAM193BQ96PV7 902 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 BTBD2Q9BX70 525 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 TELO2Q9Y4R8 837 aa4.88□□□□□ -1.63
TRAPPC13-203ENST00000415825 GOLGA6L6A8MZA4 724 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 SESN2P58004 480 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 HDLBPQ00341 1268 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 GNL2Q13823 731 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 HABP4Q5JVS0 413 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 KCNV1Q6PIU1 500 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 WNK4Q96J92 1243 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 GPR87Q9BY21 358 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 CYP4F11Q9HBI6 524 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 MRVI1Q9Y6F6 885 aa4.87□□□□□ -1.63
TRAPPC13-203ENST00000415825 B2RBV5 119 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 GSTA4O15217 222 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 DLX3O60479 287 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 ABHD16AO95870 558 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 CAPNS1P04632 268 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 GRIA2P42262 883 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 COL10A1Q03692 680 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 SLC10A6Q3KNW5 377 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 SPTY2D1Q68D10 685 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 TRIM68Q6AZZ1 485 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 BHLHA9Q7RTU4 235 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 ADGRG3Q86Y34 549 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 ZNF276Q8N554 614 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 PROKR1Q8TCW9 393 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 RABGGTAQ92696 567 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 CATSPERZQ9NTU4 200 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 GPRC5BQ9NZH0 403 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 SH3BP1Q9Y3L3 701 aa4.86□□□□□ -1.63
TRAPPC13-203ENST00000415825 A0A1W2PQU0 124 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 B3GALT2O43825 422 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 H2AFYO75367 372 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 ECE1P42892 770 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 SCNN1GP51170 649 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 ST5P78524 1137 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 ELAVL1Q15717 326 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 ARHGAP36Q6ZRI8 547 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 PRIMA1Q86XR5 153 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 GPR150Q8NGU9 434 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 CALML6Q8TD86 181 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 NELL1Q92832 810 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 GCDHQ92947 438 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 AARSD1Q9BTE6 412 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 OR10A5Q9H207 317 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 ACBD3Q9H3P7 528 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 IPPKQ9H8X2 491 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 SRPK3Q9UPE1 567 aa4.85□□□□□ -1.63
TRAPPC13-203ENST00000415825 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 FAM20BO75063 409 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 MFAP3LO75121 409 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 GJB6O95452 261 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 FGFR1P11362 822 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 HERVK_113P62684 666 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 SLC25A3Q00325 362 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 CD83Q01151 205 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 HGFACQ04756 655 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 IFRD2Q12894 506 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 MOGSQ13724 837 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 GPR19Q15760 415 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 ERCC6LQ2NKX8 1250 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 FIGNQ5HY92 759 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 STYK1Q6J9G0 422 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 KCNT2Q6UVM3 1135 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 Q6ZPA2 131 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 Q6ZRM9 215 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 MRGPREQ86SM8 312 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 GLCCI1Q86VQ1 547 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 LENG9Q96B70 501 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 VWA7Q9Y334 891 aa4.84□□□□□ -1.63
TRAPPC13-203ENST00000415825 PRODHO43272 600 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 RECQL4O94761 1208 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 IPO13O94829 963 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 ITGB1P05556 798 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 NAT1P18440 290 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 ITGB6P18564 788 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 AOAHP28039 575 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 STAT5BP51692 787 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms