RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 FCRL3Q96P31 734 aaPredicted RBP7.61□□□□□ -1.19
EPHA4-204ENST00000415749 SIN3AQ96ST3 1273 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 CDADC1Q9BWV3 514 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 SLC5A4Q9NY91 659 aa7.61□□□□□ -1.19
EPHA4-204ENST00000415749 FLT4P35916 1363 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 KDRP35968 1356 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 CCDC88AQ3V6T2 1871 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 TRBV23OR9-2A0A075B6M9 112 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 C2orf71A6NGG8 1288 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 TBX1O43435 398 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 LDHAP00338 332 aaKnown RBP7.6□□□□□ -1.19
EPHA4-204ENST00000415749 SERPINB2P05120 415 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 ITKQ08881 620 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 DUSP4Q13115 394 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 MTMR1Q13613 665 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 NFIXQ14938 502 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 RCSD1Q6JBY9 416 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 NSMFQ6X4W1 530 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 ZNF574Q6ZN55 896 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-204ENST00000415749 SPRED2Q7Z698 418 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 SCUBE1Q8IWY4 988 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 TP53INP2Q8IXH6 220 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 NAT16Q8N8M0 369 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 WDR66Q8TBY9 1149 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 DDX1Q92499 740 aaKnown RBP7.6□□□□□ -1.19
EPHA4-204ENST00000415749 ZNF622Q969S3 477 aaKnown RBP eCLIP7.6□□□□□ -1.19
EPHA4-204ENST00000415749 MTMR8Q96EF0 704 aa7.6□□□□□ -1.19
EPHA4-204ENST00000415749 TAF1DQ9H5J8 278 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-204ENST00000415749 KIF24Q5T7B8 1368 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 PRODHO43272 600 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 SCG5P05408 212 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 HSP90AB1P08238 724 aaKnown RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 PABPC1P11940 636 aaKnown RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 IFNGR1P15260 489 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 FUT4P22083 530 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 GFRA1P56159 465 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 SCRN1Q12765 414 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 MAP4K2Q12851 820 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 RALBP1Q15311 655 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 RTP2Q5QGT7 225 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 SLC23A3Q6PIS1 610 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 CYP2R1Q6VVX0 501 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 LHFPL2Q6ZUX7 228 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 TTC8Q8TAM2 541 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 FCRL2Q96LA5 508 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 ALPK1Q96QP1 1244 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 MRPL4Q9BYD3 311 aaKnown RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 CCDC8Q9H0W5 538 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 PAK6Q9NQU5 681 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 CHST12Q9NRB3 414 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 AASDHPPTQ9NRN7 309 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 AP5S1Q9NUS5 200 aa7.59□□□□□ -1.19
EPHA4-204ENST00000415749 INTS7Q9NVH2 962 aaKnown RBP7.59□□□□□ -1.19
EPHA4-204ENST00000415749 MYH14Q7Z406 1995 aaKnown RBP7.59□□□□□ -1.2
EPHA4-204ENST00000415749 TONSLQ96HA7 1378 aa7.59□□□□□ -1.2
EPHA4-204ENST00000415749 CAPNS1P04632 268 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 PAX3P23760 479 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
EPHA4-204ENST00000415749 BRD3Q15059 726 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 PLCL1Q15111 1095 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 C4orf46Q504U0 113 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 NECAB2Q7Z6G3 386 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 CNTROBQ8N137 903 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 AHI1Q8N157 1196 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 PPM1KQ8N3J5 372 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 PI4K2BQ8TCG2 481 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 COPS5Q92905 334 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 MCOLN1Q9GZU1 580 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 UBA5Q9GZZ9 404 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 SLAMF8Q9P0V8 285 aa7.58□□□□□ -1.2
EPHA4-204ENST00000415749 ABT1Q9ULW3 272 aaKnown RBP7.58□□□□□ -1.2
EPHA4-204ENST00000415749 PDE4DIPQ5VU43 2346 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 TMEM82A0PJX8 343 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 FGF10O15520 208 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-204ENST00000415749 TBC1D8O95759 1140 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 ECI1P42126 302 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 GRIA2P42262 883 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.2
EPHA4-204ENST00000415749 PLEKHO1Q53GL0 409 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-204ENST00000415749 RNF219Q5W0B1 726 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-204ENST00000415749 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 KSR2Q6VAB6 950 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 WFDC3Q8IUB2 231 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 PTCHD1Q96NR3 888 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 GPR101Q96P66 508 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-204ENST00000415749 MCMBPQ9BTE3 642 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 TAOK3Q9H2K8 898 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 NARFQ9UHQ1 456 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 TMEM59LQ9UK28 342 aa7.57□□□□□ -1.2
EPHA4-204ENST00000415749 NOB1Q9ULX3 412 aaKnown RBP7.57□□□□□ -1.2
EPHA4-204ENST00000415749 WASHC2AQ641Q2 1341 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 CLSPNQ9HAW4 1339 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 HYAL3O43820 417 aaPredicted RBP7.56□□□□□ -1.2
EPHA4-204ENST00000415749 SH3BP5O60239 455 aa7.56□□□□□ -1.2
EPHA4-204ENST00000415749 PPFIA4O75335 1185 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms