RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ZC2HC1CQ53FD0 456 aaPredicted RBP10.8□□□□□ -0.68
SS18-203ENST00000415083 FRMD5Q7Z6J6 570 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 ZDHHC14Q8IZN3 488 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 GOLGA6L1Q8N7Z2 621 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 ACTRT1Q8TDG2 376 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 RBM17Q96I25 401 aaKnown RBP10.8□□□□□ -0.68
SS18-203ENST00000415083 WDR18Q9BV38 432 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 ERVK-5Q9HDB9 667 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 DDX3YO15523 660 aaKnown RBP10.8□□□□□ -0.68
SS18-203ENST00000415083 BBOX1O75936 387 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 RPA1P27694 616 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 MMP14P50281 582 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 ZNF844Q08AG5 666 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 FBXW10Q5XX13 1052 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 SEC14L1Q92503 715 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 TXLNGYQ9BZA5 131 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 RNF14Q9UBS8 474 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 SLC12A6Q9UHW9 1150 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 TSKSQ9UJT2 592 aa10.8□□□□□ -0.68
SS18-203ENST00000415083 A0A1W2PRG0 241 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 MPHOSPH10O00566 681 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 HSF2BPO75031 334 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 GNA14O95837 355 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 HOXA13P31271 388 aaPredicted RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 COPB2P35606 906 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 QPCTQ16769 361 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 CBWD6Q4V339 395 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 CBWD3Q5JTY5 395 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 CBWD5Q5RIA9 395 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 AADACL2Q6P093 401 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 ARHGEF26Q96DR7 871 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 HES6Q96HZ4 224 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 NGLY1Q96IV0 654 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 NUCKS1Q9H1E3 243 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 PPP1R9AQ9ULJ8 1098 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 COG5Q9UP83 839 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 NOC2LQ9Y3T9 749 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 CES2O00748 559 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 SART1O43290 800 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 AFPP02771 609 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 NR3C1P04150 777 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 HDLBPQ00341 1268 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 PTGISQ16647 500 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 NAA35Q5VZE5 725 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 ALKBH5Q6P6C2 394 aaKnown RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 GBP6Q6ZN66 633 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 EFCAB13Q8IY85 973 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 CRAMP1Q96RY5 1269 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 LRRC27Q9C0I9 530 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 ZHX3Q9H4I2 956 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 TAF1DQ9H5J8 278 aaPredicted RBP10.79□□□□□ -0.68
SS18-203ENST00000415083 BCS1LQ9Y276 419 aa10.79□□□□□ -0.68
SS18-203ENST00000415083 PPATQ06203 517 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 TCP10Q12799 353 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 ATP6V1G3Q96LB4 118 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 AMACRQ9UHK6 382 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
SS18-203ENST00000415083 OPA1O60313 960 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 SREBF1P36956 1147 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 PAK2Q13177 524 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 RINT1Q6NUQ1 792 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 CPNE8Q86YQ8 564 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 SP8Q8IXZ3 490 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 ZSWIM2Q8NEG5 633 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 PIGOQ8TEQ8 1089 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 PAGR1Q9BTK6 254 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 BHMT2Q9H2M3 363 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 FRMPD4Q14CM0 1322 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 A0A087WUV0 522 aaPredicted RBP10.78□□□□□ -0.68
SS18-203ENST00000415083 PDXKO00764 312 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 CETN3O15182 167 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 TTI1O43156 1089 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 NR1D1P20393 614 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 EXOC3L4Q17RC7 722 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 USH1GQ495M9 461 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 DCAF17Q5H9S7 520 aaPredicted RBP10.78□□□□□ -0.68
SS18-203ENST00000415083 CFAP58Q5T655 872 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 C1orf131Q8NDD1 294 aaKnown RBP10.78□□□□□ -0.68
SS18-203ENST00000415083 LMO3Q8TAP4 145 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 HSD17B14Q9BPX1 270 aa10.78□□□□□ -0.68
SS18-203ENST00000415083 ARMCX3Q9UH62 379 aaPredicted RBP10.78□□□□□ -0.68
SS18-203ENST00000415083 DAPK3O43293 454 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 GFPT2O94808 682 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 GDF11O95390 407 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 HOXA7P31268 230 aaPredicted RBP10.77□□□□□ -0.68
SS18-203ENST00000415083 GALCP54803 685 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 RPS6KA1Q15418 735 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.68
SS18-203ENST00000415083 SLFN13Q68D06 897 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 MOXD1Q6UVY6 613 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 PPP4R3CPQ6ZMV5 832 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 C1orf186Q6ZWK4 172 aa10.77□□□□□ -0.68
SS18-203ENST00000415083 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.68
SS18-203ENST00000415083 EIF2AK1Q9BQI3 630 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms