RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 GIT2Q14161 759 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 MAP3K21Q5TCX8 1036 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 FAM160B1Q5W0V3 765 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 UNC13DQ70J99 1090 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 TRMT44Q8IYL2 757 aaKnown RBP10.77□□□□□ -0.69
RIF1-202ENST00000414861 AZI2Q9H6S1 392 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 ANKEF1Q9NU02 776 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 ANO10Q9NW15 660 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 EVPLQ92817 2033 aa10.77□□□□□ -0.69
RIF1-202ENST00000414861 FRMD3A2A2Y4 597 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 MYADML2A6NDP7 307 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 RHOBTB3O94955 611 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 KRT18P05783 430 aaKnown RBP10.76□□□□□ -0.69
RIF1-202ENST00000414861 CNGA1P29973 690 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 MAPK7Q13164 816 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 KCNB1Q14721 858 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 MTERF2Q49AM1 385 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 XKR3Q5GH77 459 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 DAW1Q8N136 415 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 TRIML1Q8N9V2 468 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 RNF214Q8ND24 703 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 GLIS3Q8NEA6 775 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 CEP170P1Q96L14 293 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 C16orf70Q9BSU1 422 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 FGFBP2Q9BYJ0 223 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 RBSNQ9H1K0 784 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 EXOC1Q9NV70 894 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 A6NJR5 290 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 SEPT4O43236 478 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 DKC1O60832 514 aaKnown RBP eCLIP10.76□□□□□ -0.69
RIF1-202ENST00000414861 XRCC6P12956 609 aaKnown RBP eCLIP10.76□□□□□ -0.69
RIF1-202ENST00000414861 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
RIF1-202ENST00000414861 SOX10P56693 466 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 BEX3Q00994 111 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 GSE1Q14687 1217 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 PLCB4Q15147 1175 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 MAEAQ7L5Y9 396 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 PLPPR4Q7Z2D5 763 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 KIAA0895Q8NCT3 520 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 PXYLP1Q8TE99 480 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 CCDC43Q96MW1 224 aaKnown RBP10.76□□□□□ -0.69
RIF1-202ENST00000414861 CEP89Q96ST8 783 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 LRRC27Q9C0I9 530 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 CYP26B1Q9NR63 512 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
RIF1-202ENST00000414861 SYNRGQ9UMZ2 1314 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 TRIP12Q14669 1992 aaPredicted RBP10.75□□□□□ -0.69
RIF1-202ENST00000414861 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 FSD2A1L4K1 749 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 ZBTB42B2RXF5 422 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 DUSP11O75319 330 aaKnown RBP10.75□□□□□ -0.69
RIF1-202ENST00000414861 INHAP05111 366 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 STK4Q13043 487 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 ATP8B4Q8TF62 1192 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 RNPEPQ9H4A4 650 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 SMARCAD1Q9H4L7 1026 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 GPRC5CQ9NQ84 441 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 TBC1D7Q9P0N9 293 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 SFI1A8K8P3 1242 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 HIP1RO75146 1068 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 PPFIA4O75335 1185 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 PGK1P00558 417 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 GUCY2CP25092 1073 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 TARBP2Q15633 366 aaKnown RBP10.75□□□□□ -0.69
RIF1-202ENST00000414861 DGKDQ16760 1214 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 ZNF658Q5TYW1 1059 aaPredicted RBP10.75□□□□□ -0.69
RIF1-202ENST00000414861 OTUD6AQ7L8S5 288 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 SFR1Q86XK3 245 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 SLAIN1Q8ND83 568 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
RIF1-202ENST00000414861 SLC39A2Q9NP94 309 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 XPNPEP1Q9NQW7 623 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 RMND1Q9NWS8 449 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 ERAP1Q9NZ08 941 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 KCND2Q9NZV8 630 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 MAPK8IP1Q9UQF2 711 aa10.75□□□□□ -0.69
RIF1-202ENST00000414861 SCN10AQ9Y5Y9 1956 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 GRK4P32298 578 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 ZNF165P49910 485 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 ARHGEF6Q15052 776 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 FSCN1Q16658 493 aaKnown RBP10.74□□□□□ -0.69
RIF1-202ENST00000414861 SH3TC2Q8TF17 1288 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 PPP1R13LQ8WUF5 828 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 TRAPPC12Q8WVT3 735 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
RIF1-202ENST00000414861 ZBTB10Q96DT7 871 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 FAM167AQ96KS9 214 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 AP5M1Q9H0R1 490 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 Q9Y3F1 56 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 PCDHA2Q9Y5H9 948 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 H3BRB1 525 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 TBCAO75347 108 aaKnown RBP10.74□□□□□ -0.69
RIF1-202ENST00000414861 F2P00734 622 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 C6orf222P0C671 652 aaPredicted RBP10.74□□□□□ -0.69
RIF1-202ENST00000414861 PRCPP42785 496 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 SLC26A2P50443 739 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 CASP5P51878 434 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms