RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CYBAP13498 195 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 NPEPPSP55786 919 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 PRKCEQ02156 737 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 BBXQ8WY36 941 aaPredicted RBP17.26■□□□□ 0.35
SHMT2-202ENST00000414700 DNAJC19Q96DA6 116 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 RPN1P04843 607 aaKnown RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 RARRES1P49788 294 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 ASIC1P78348 528 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 AMPD3Q01432 767 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 CACNB2Q08289 660 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 LAMC2Q13753 1193 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 RIOK3O14730 519 aaKnown RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 ADCY3O60266 1144 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 SMC2O95347 1197 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 MARK3P27448 753 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 HOXD10P28358 340 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 IRF5Q13568 498 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 ANO6Q4KMQ2 910 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 RINT1Q6NUQ1 792 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 SMYD4Q8IYR2 804 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 OR6J1Q8NGC5 347 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 HPS3Q969F9 1004 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
SHMT2-202ENST00000414700 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-202ENST00000414700 MYH11P35749 1972 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 STAT5BP51692 787 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 MORC3Q14149 939 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 MFSD14CQ5VZR4 134 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 KCTD17Q8N5Z5 321 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 PPTC7Q8NI37 304 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 KIAA1524Q8TCG1 905 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 RAET1EQ8TD07 263 aa17.24■□□□□ 0.35
SHMT2-202ENST00000414700 RSPH10B2B2RC85 870 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 MYL1P05976 194 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 RSPH10BP0C881 870 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
SHMT2-202ENST00000414700 IDEP14735 1019 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 AFAP1L1Q8TED9 768 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 GLG1Q92896 1179 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 REEP2Q9BRK0 252 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-202ENST00000414700 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 LGR5O75473 907 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-202ENST00000414700 GIT2Q14161 759 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 STX1AQ16623 288 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 XKR9Q5GH70 373 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
SHMT2-202ENST00000414700 FAM184BQ9ULE4 1060 aa17.23■□□□□ 0.35
SHMT2-202ENST00000414700 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 NKRFO15226 690 aaKnown RBP eCLIP17.22■□□□□ 0.35
SHMT2-202ENST00000414700 GNRH1P01148 92 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 LGALS2P05162 132 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 MMP3P08254 477 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 AKR1A1P14550 325 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 CNGA1P29973 690 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 NLRP12P59046 1061 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 GABPB1Q06547 395 aaPredicted RBP17.22■□□□□ 0.35
SHMT2-202ENST00000414700 SYCP1Q15431 976 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 PADI6Q6TGC4 694 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 AZI2Q9H6S1 392 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 EMSYQ7Z589 1322 aa17.22■□□□□ 0.35
SHMT2-202ENST00000414700 MKI67P46013 3256 aaKnown RBP17.22■□□□□ 0.35
SHMT2-202ENST00000414700 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
SHMT2-202ENST00000414700 OATP04181 439 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 CNNM4Q6P4Q7 775 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 HMGCRP04035 888 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
SHMT2-202ENST00000414700 BEX3Q00994 111 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 XKR3Q5GH77 459 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 UNC13DQ70J99 1090 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 GLIS3Q8NEA6 775 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 RNPEPQ9H4A4 650 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 ANO10Q9NW15 660 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 PTCH2Q9Y6C5 1203 aa17.21■□□□□ 0.35
SHMT2-202ENST00000414700 PPFIA4O75335 1185 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 CD44P16070 742 aaKnown RBP17.2■□□□□ 0.34
SHMT2-202ENST00000414700 SOX10P56693 466 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 EHHADHQ08426 723 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 STK4Q13043 487 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 COASYQ13057 564 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms