RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAPQ12884 760 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 DDB1Q16531 1140 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 TCERG1LQ5VWI1 586 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 RNF219Q5W0B1 726 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 NECAB2Q7Z6G3 386 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 RASSF3Q86WH2 238 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 SPATS2Q86XZ4 545 aaKnown RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 LRRC56Q8IYG6 542 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 CARFQ8N187 725 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 ATL2Q8NHH9 583 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 WDR66Q8TBY9 1149 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 ZCCHC14Q8WYQ9 949 aaKnown RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 MAML3Q96JK9 1138 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 IRF2BPLQ9H1B7 796 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 OR10A5Q9H207 317 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 CROTQ9UKG9 612 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 NOP58Q9Y2X3 529 aaKnown RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 UBA6A0AVT1 1052 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 K7ESF4 209 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 CDK11BP21127 795 aaKnown RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 IBSPP21815 317 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 IL13P35225 146 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 SARSP49591 514 aaKnown RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 IL13RA1P78552 427 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 ROM1Q03395 351 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 FAM26FQ5R3K3 315 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 BROXQ5VW32 411 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 KANK2Q63ZY3 851 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 LRSAM1Q6UWE0 723 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 FRMD7Q6ZUT3 714 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 KANSL1Q7Z3B3 1105 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 PHYKPLQ8IUZ5 450 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 STPG3Q8N7X2 389 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 ZSCAN18Q8TBC5 510 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 YTHDC1Q96MU7 727 aaKnown RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 TACO1Q9BSH4 297 aaKnown RBP5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 ZDHHC5Q9C0B5 715 aa5.32□□□□□ -1.56
HMGB1P11-201ENST00000413899 H0Y858 1186 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 KLHL18O94889 574 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 APEX1P27695 318 aaKnown RBP5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 CDKN1CP49918 316 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 SLC6A3Q01959 620 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 MOGSQ13724 837 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 MYBPC3Q14896 1274 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 PHF19Q5T6S3 580 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 SLFN12LQ6IEE8 588 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 PRPF38AQ8NAV1 312 aaKnown RBP5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 RTF1Q92541 710 aaKnown RBP5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 ERCC4Q92889 916 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 ZNF496Q96IT1 587 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 GOLGA2P5Q9HBQ8 144 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 FBXO10Q9UK96 956 aa5.31□□□□□ -1.56
HMGB1P11-201ENST00000413899 C9orf118A6NHY6 69 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 ALG1L2C9J202 215 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 DDX3XO00571 662 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 NFATC3Q12968 1075 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 TIGD7Q6NT04 549 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 TRMT10BQ6PF06 316 aaKnown RBP5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 SIAH1Q8IUQ4 282 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 C7orf31Q8N865 590 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 TUBGCP5Q96RT8 1024 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 PUS7LQ9H0K6 701 aaKnown RBP5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 WNT8AQ9H1J5 351 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 L2HGDHQ9H9P8 463 aa5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 LUC7LQ9NQ29 371 aaKnown RBP5.3□□□□□ -1.56
HMGB1P11-201ENST00000413899 hCG_2014768A0A024R1R8 64 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 A0A1B0GTL3 188 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 KDM1AO60341 852 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 CUTAO60888 179 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 PRKD3O94806 890 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 POLD1P28340 1107 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 RGS3P49796 1198 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 SLURP1P55000 103 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 BCAR1P56945 870 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 TMPRSS15P98073 1019 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 CD83Q01151 205 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 TOP3AQ13472 1001 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 TMEM200BQ69YZ2 307 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 KIAA1841Q6NSI8 718 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 ESPNLQ6ZVH7 1005 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 HDGFL2Q7Z4V5 671 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 REXO1L1PQ8IX06 675 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 RPUSD2Q8IZ73 545 aaKnown RBP5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 ADGRG2Q8IZP9 1017 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 NUDT10Q8NFP7 164 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 WDR48Q8TAF3 677 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 ADAMTS17Q8TE56 1095 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 NUDT11Q96G61 164 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 PITHD1Q9GZP4 211 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 KATNBL1Q9H079 304 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 POFUT1Q9H488 388 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 SLC5A4Q9NY91 659 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 FTSJ1Q9UET6 329 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 MSRAQ9UJ68 235 aa5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 NOC2LQ9Y3T9 749 aaKnown RBP5.29□□□□□ -1.56
HMGB1P11-201ENST00000413899 ELL2O00472 640 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms