RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 KAT6AQ92794 2004 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 TMEM221A6NGB7 291 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 M0R296 226 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 DHX15O43143 795 aaKnown RBP13.88□□□□□ -0.19
LIMS2-210ENST00000413578 ATF7P17544 494 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-210ENST00000413578 KLRC1P26715 233 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 SREBF1P36956 1147 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 FAM189BP81408 668 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
LIMS2-210ENST00000413578 NECTIN1Q15223 517 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 IER5LQ5T953 404 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 MICU3Q86XE3 530 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 CCDC60Q8IWA6 550 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-210ENST00000413578 CRYGNQ8WXF5 182 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 PHOX2BQ99453 314 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 ANO3Q9BYT9 981 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
LIMS2-210ENST00000413578 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 COL1A2P08123 1366 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 USP34Q70CQ2 3546 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 HBP1O60381 514 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 FGF18O76093 207 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 FOSP01100 380 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-210ENST00000413578 ATP4AP20648 1035 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 ERVFC1P60507 584 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 TCF15Q12870 199 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
LIMS2-210ENST00000413578 PKN1Q16512 942 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 DUSP6Q16828 381 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 CREB3L3Q68CJ9 461 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 TMEM184AQ6ZMB5 413 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 SLC24A5Q71RS6 500 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 NIPA1Q7RTP0 329 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 ASIC4Q96FT7 647 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 CDCA3Q99618 268 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-210ENST00000413578 ADAM2Q99965 735 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 CWH43Q9H720 699 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 TLE6Q9H808 572 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 TLR9Q9NR96 1032 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 LRFN2Q9ULH4 789 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 PCDHB12Q9Y5F1 795 aa13.87□□□□□ -0.19
LIMS2-210ENST00000413578 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 TBKBP1A7MCY6 615 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 FAM86B1E9PN63 330 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 PER2O15055 1255 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 C22orf31O95567 290 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 FAM86B2P0C5J1 330 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 NAPAP54920 295 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 AP3B2Q13367 1082 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 DSC3Q14574 896 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-210ENST00000413578 COLGALT1Q8NBJ5 622 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 RASGRP4Q8TDF6 673 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 PBXIP1Q96AQ6 731 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
LIMS2-210ENST00000413578 TYW1Q9NV66 732 aaKnown RBP13.86□□□□□ -0.19
LIMS2-210ENST00000413578 ST3GAL5Q9UNP4 418 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 LZTS1Q9Y250 596 aa13.86□□□□□ -0.19
LIMS2-210ENST00000413578 DMDP11532 3685 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 GPR32O75388 356 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 CRYBB1P53674 252 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-210ENST00000413578 PTPN5P54829 565 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 PLCB3Q01970 1234 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 SIGLEC14Q08ET2 396 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 PDE12Q6L8Q7 609 aaKnown RBP13.85□□□□□ -0.19
LIMS2-210ENST00000413578 FBXL6Q8N531 539 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 AAASQ9NRG9 546 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-210ENST00000413578 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
LIMS2-210ENST00000413578 TMEM161AQ9NX61 479 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 BARHL2Q9NY43 387 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 BRPF3Q9ULD4 1205 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 GINS2Q9Y248 185 aa13.85□□□□□ -0.19
LIMS2-210ENST00000413578 MAFBQ9Y5Q3 323 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-210ENST00000413578 DENND3A2RUS2 1198 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 GPR182O15218 404 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 CYP3A4P08684 503 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 FGFR1P11362 822 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 ADCY7P51828 1080 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 EXOSC10Q01780 885 aaKnown RBP13.84□□□□□ -0.19
LIMS2-210ENST00000413578 KIZQ2M2Z5 673 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 ODR4Q5SWX8 454 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 FAM160B1Q5W0V3 765 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 PDXDC2PQ6P474 469 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms