RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CRKP46108 304 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 IL9RQ01113 521 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 EN1Q05925 392 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 CUL1Q13616 776 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 FAM47CQ5HY64 1035 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 C6orf118Q5T5N4 469 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 DMAP1Q9NPF5 467 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 KIDINS220Q9ULH0 1771 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 CPDO75976 1380 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 hCG_1984214I3L0E3 225 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 LSM1O15116 133 aaKnown RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 DCTN3O75935 186 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 CD19P15391 556 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 RAB27AP51159 221 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 STAT2P52630 851 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 CACNB3P54284 484 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 ANKRD20A8PQ5CZ79 823 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 TRPM8Q7Z2W7 1104 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 ZBTB8OSQ8IWT0 167 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 ZNF713Q8N859 430 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 RBM41Q96IZ5 413 aaKnown RBP9.16□□□□□ -0.94
PBRM1-209ENST00000412587 TMCO1Q9UM00 188 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 PIK3C2BO00750 1634 aa9.16□□□□□ -0.94
PBRM1-209ENST00000412587 MYO3BQ8WXR4 1341 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 CCDC189A1A4V9 331 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 SORBS3O60504 671 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 GNA14O95837 355 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 KRT19P08727 400 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 BCRP11274 1271 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 TNNI1P19237 187 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 FOXO4P98177 505 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 FAM26FQ5R3K3 315 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 RC3H1Q5TC82 1133 aaKnown RBP9.15□□□□□ -0.94
PBRM1-209ENST00000412587 RNPC3Q96LT9 517 aaKnown RBP9.15□□□□□ -0.94
PBRM1-209ENST00000412587 PRDM16Q9HAZ2 1276 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 FAM53CQ9NYF3 392 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 IL1RAPL1Q9NZN1 696 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.15□□□□□ -0.94
PBRM1-209ENST00000412587 LAD1O00515 517 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 ABLIM1O14639 778 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
PBRM1-209ENST00000412587 HSPA9P38646 679 aaKnown RBP9.15□□□□□ -0.94
PBRM1-209ENST00000412587 CYP2J2P51589 502 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 ZNF827Q17R98 1081 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 LIN9Q5TKA1 542 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 NUGGCQ68CJ6 796 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 HACE1Q8IYU2 909 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 KAT2BQ92831 832 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 COA7Q96BR5 231 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 WDR37Q9Y2I8 494 aa9.15□□□□□ -0.94
PBRM1-209ENST00000412587 ARIH1Q9Y4X5 557 aaPredicted RBP9.15□□□□□ -0.94
PBRM1-209ENST00000412587 P4HA2O15460 535 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 NDUFA10O95299 355 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 ASNSP08243 561 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 NQO1P15559 274 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 UBXN2AP68543 259 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 MRPS25P82663 173 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 KIF23Q02241 960 aaPredicted RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 DMPKQ09013 629 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 KLHL30Q0D2K2 578 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 SYDE2Q5VT97 1194 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 TMEM179Q6ZVK1 233 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 DPP9Q86TI2 863 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 CXorf38Q8TB03 319 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 PRPF31Q8WWY3 499 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 TSNARE1Q96NA8 513 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 TDRD3Q9H7E2 651 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 PANK4Q9NVE7 773 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 GALNT8Q9NY28 637 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 SLC4A7Q9Y6M7 1214 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 H0YCG3 227 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 ECE2O60344 883 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 PPM1FP49593 454 aaPredicted RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 ARPC4P59998 168 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 ARHGEF18Q6ZSZ5 1173 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 ENOX1Q8TC92 643 aaKnown RBP9.15□□□□□ -0.95
PBRM1-209ENST00000412587 TBCKQ8TEA7 893 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 NRBP2Q9NSY0 501 aa9.15□□□□□ -0.95
PBRM1-209ENST00000412587 ARHGAP42A6NI28 874 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 MFAP3LO75121 409 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 GH2P01242 217 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 OSBPP22059 807 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 MAGOHP61326 146 aaKnown RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 NR5A1Q13285 461 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 SEL1L2Q5TEA6 688 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 FAM186BQ8IYM0 893 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 MAGOHBQ96A72 148 aaKnown RBP9.14□□□□□ -0.95
PBRM1-209ENST00000412587 RUNDC3BQ96NL0 473 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
PBRM1-209ENST00000412587 ADD3Q9UEY8 706 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms