RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 ADPGKQ9BRR6 497 aa12.15□□□□□ -0.47
PTPRF-204ENST00000412568 PPP1R3GB7ZBB8 358 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 GOLGA8SH3BPF8 625 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 WNT7AO00755 349 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 PTK2Q05397 1052 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 IFRD2Q12894 506 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-204ENST00000412568 PAK2Q13177 524 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 CATSPER3Q86XQ3 398 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 APOBEC3FQ8IUX4 373 aaKnown RBP12.14□□□□□ -0.47
PTPRF-204ENST00000412568 ZNF653Q96CK0 615 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 SYNJ2BP-COX16A0A087WUM0 186 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 CAP2P40123 477 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
PTPRF-204ENST00000412568 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 TAAR1Q96RJ0 339 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 NAP1L3Q99457 506 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-204ENST00000412568 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 ACAD9Q9H845 621 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 TBC1D22BQ9NU19 505 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 COX16Q9P0S2 106 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 AKAP12Q02952 1782 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 NCK2O43639 380 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 RHOBTB3O94955 611 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 TNNC2P02585 160 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 NR3C2P08235 984 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 FERP16591 822 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 KCNB1Q14721 858 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 RAD9BQ6WBX8 426 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
PTPRF-204ENST00000412568 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
PTPRF-204ENST00000412568 MFAP3P55082 362 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 AP1M1Q9BXS5 423 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 KNDC1Q76NI1 1749 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 NDUFAB1O14561 156 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 HAUS6Q7Z4H7 955 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 RNF34Q969K3 372 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 MSTO1Q9BUK6 570 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 ABCB6Q9NP58 842 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 NFIBO00712 420 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 WNT10BO00744 389 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 PLSCR1O15162 318 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 MSH4O15457 936 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 THAP12O43422 761 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 SERPING1P05155 500 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 GRB10Q13322 594 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 PPP2R5AQ15172 486 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 CCDC121Q6ZUS5 278 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 PASD1Q8IV76 773 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
PTPRF-204ENST00000412568 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTPRF-204ENST00000412568 MED24O75448 989 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 SNX1Q13596 522 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 PPP2R5DQ14738 602 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 GIMAP8Q8ND71 665 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 KIFC3Q9BVG8 833 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 TEX13BQ9BXU2 312 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 MYO1FO00160 1098 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 ATP2A1O14983 1001 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 EYA4O95677 639 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 ARP10275 920 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 GYS2P54840 703 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 KRT76Q01546 638 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 KCTD16Q68DU8 428 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 C7orf25Q9BPX7 421 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 CCDC77Q9BR77 488 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 TYW1Q9NV66 732 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 LIMA1Q9UHB6 759 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 TTLL3Q9Y4R7 772 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 PCDHA10Q9Y5I2 948 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 ZNF233A6NK53 670 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 DDNO94850 711 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 YWHABP31946 246 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 NFX1Q12986 1120 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 EPHA7Q15375 998 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 CPLX4Q7Z7G2 160 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 RIOX1Q9H6W3 641 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 EPB41L5Q9HCM4 733 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 ABT1Q9ULW3 272 aaKnown RBP12.12□□□□□ -0.47
PTPRF-204ENST00000412568 JRKLQ9Y4A0 524 aa12.12□□□□□ -0.47
PTPRF-204ENST00000412568 GYPCP04921 128 aa12.11□□□□□ -0.47
PTPRF-204ENST00000412568 ATP1A2P50993 1020 aa12.11□□□□□ -0.47
PTPRF-204ENST00000412568 PSMC5P62195 406 aa12.11□□□□□ -0.47
PTPRF-204ENST00000412568 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
PTPRF-204ENST00000412568 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
PTPRF-204ENST00000412568 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-204ENST00000412568 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
PTPRF-204ENST00000412568 H0YCG3 227 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms