RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 NECAB2Q7Z6G3 386 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TRIM48Q8IWZ4 208 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZZZ3Q8IYH5 903 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 NETO2Q8NC67 525 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PHOSPHO1Q8TCT1 267 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 FRS2Q8WU20 508 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TRMT2BQ96GJ1 504 aaKnown RBP3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C1orf159Q96HA4 380 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PTPN18Q99952 460 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SYT3Q9BQG1 590 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 HOMER2Q9NSB8 354 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CLDND1Q9NY35 253 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PLB1Q6P1J6 1458 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 FGD5Q6ZNL6 1462 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PHLDB1Q86UU1 1377 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 H7C1D1 291 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ARVCFO00192 962 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CRTAMO95727 393 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C6orf222P0C671 652 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 JMJD7P0C870 316 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GLI4P10075 376 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GJA4P35212 333 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GRIA2P42262 883 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PRKD1Q15139 912 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PRSS53Q2L4Q9 553 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 HS1BP3Q53T59 392 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PIK3R6Q5UE93 754 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 FOXB2Q5VYV0 432 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C16orf59Q7L2K0 433 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 STK32CQ86UX6 486 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 THNSL2Q86YJ6 484 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RIOX2Q8IUF8 465 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LZTR1Q8N653 840 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C2orf69Q8N8R5 385 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KYQ8NBH2 561 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CHST14Q8NCH0 376 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 NLGN2Q8NFZ4 835 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ORAI3Q9BRQ5 295 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 IFT22Q9H7X7 185 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KANSL2Q9H9L4 492 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TRIM39Q9HCM9 518 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 NGRNQ9NPE2 291 aaKnown RBP3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GPRC5CQ9NQ84 441 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SAMD15Q9P1V8 674 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PCDHA2Q9Y5H9 948 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RAD54L2Q9Y4B4 1467 aa3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PRG4Q92954 1404 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ERICH3Q5RHP9 1530 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TCRBV16S1A1N1A0A5B0 115 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 WNT9AO14904 365 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KPNA6O60684 536 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZBTB7AO95365 584 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 S100BP04271 92 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CAPNS1P04632 268 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CYP1A1P04798 512 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C8BP07358 591 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SLC6A11P48066 632 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 EPHB4P54760 987 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 IL2P60568 153 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 DGCR2P98153 550 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PTH1RQ03431 593 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 USP39Q53GS9 565 aaKnown RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZNF662Q6ZS27 426 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CEP68Q76N32 757 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SPATS2Q86XZ4 545 aaKnown RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KREMEN2Q8NCW0 462 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LEO1Q8WVC0 666 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SEC14L1Q92503 715 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 E2F7Q96AV8 911 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PEX11GQ96HA9 241 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TARS2Q9BW92 718 aaKnown RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 BOCQ9BWV1 1114 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PCIF1Q9H4Z3 704 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CATSPERZQ9NTU4 200 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 MARCH2Q9P0N8 246 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ATP8A1Q9Y2Q0 1164 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TRAF6Q9Y4K3 522 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TNPO3Q9Y5L0 923 aaKnown RBP3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KDM6BO15054 1643 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TOP2BQ02880 1626 aa3.5□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SLC12A8A0AV02 714 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CCDC66A2RUB6 948 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C7orf72A4D263 438 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C9orf118A6NHY6 69 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GSG1L2A8MUP6 293 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RAB11FIP3O75154 756 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 DNAJC8O75937 253 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 DNM2P50570 870 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KPNA1P52294 538 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KRTAP10-11P60412 298 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 EXOSC10Q01780 885 aaKnown RBP3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SLC9A5Q14940 896 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GPR19Q15760 415 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 NTRK3Q16288 839 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 FIGNQ5HY92 759 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SLFN13Q68D06 897 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CDCA2Q69YH5 1023 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms