RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SRGAP2O75044 1071 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 ABCD1P33897 745 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 ANKS3Q6ZW76 656 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 CAPN10Q9HC96 672 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 SFI1A8K8P3 1242 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 CAPZA2P47755 286 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 GOLGA8MH3BSY2 632 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 PPP3CCP48454 512 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 POU5F1BQ06416 359 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 GALNT17Q6IS24 598 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 DONSONQ9NYP3 566 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 ZBTB1Q9Y2K1 713 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 RPSAP08865 295 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 CA4P22748 312 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 ZNF568Q3ZCX4 644 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 SMYD4Q8IYR2 804 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 TMEM94Q12767 1356 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 PCCAP05165 728 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 SRRM1Q8IYB3 904 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 LARP4BQ92615 738 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 EAF2Q96CJ1 260 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 TMEM206Q9H813 350 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 ZC4H2Q9NQZ6 224 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 MYO9BQ13459 2157 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 MAP4P27816 1152 aaKnown RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 GTF2H3Q13889 308 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 TAF1BQ53T94 588 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 RRM2BQ7LG56 351 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 RTKN2Q8IZC4 609 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 IQCDQ96DY2 449 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 TRAF3IP3Q9Y228 551 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 LEMD3Q9Y2U8 911 aa12.03□□□□□ -0.48
PRPF40A-202ENST00000410080 PRRG1O14668 218 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 GAP43P17677 238 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 OTUD5Q96G74 571 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 ZFP42Q96MM3 310 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 ATP8A1Q9Y2Q0 1164 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 UGGT1Q9NYU2 1555 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 PAPOLAP51003 745 aaKnown RBP12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 FAM26FQ5R3K3 315 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 FAM133AQ8N9E0 248 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 TCP11Q8WWU5 503 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 DCUN1D1Q96GG9 259 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 PPP1R36Q96LQ0 422 aa12.02□□□□□ -0.48
PRPF40A-202ENST00000410080 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 DACH2Q96NX9 599 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 CENPKQ9BS16 269 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SPON2Q9BUD6 331 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SAMSN1Q9NSI8 373 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 STX18Q9P2W9 335 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SCRN1Q12765 414 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 ZNF699Q32M78 642 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 TCP11X2Q5H9J9 407 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 MEI1Q5TIA1 1274 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 RASIP1Q5U651 963 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SUN2Q9UH99 717 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 STRIP2Q9ULQ0 834 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 PEX19P40855 299 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 TMED1Q13445 227 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 PATL1Q86TB9 770 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 GIMAP8Q8ND71 665 aaPredicted RBP12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 NAF1Q96HR8 494 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 TRIM55Q9BYV6 548 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 TRIM4Q9C037 500 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 DNAJC17Q9NVM6 304 aaKnown RBP12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 TJP2Q9UDY2 1190 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 LRRC53A6NM62 1247 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 GOLGA8KD6RF30 607 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SPDYE7PQ495Y7 208 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 RASSF3Q86WH2 238 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 MFN1Q8IWA4 741 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
PRPF40A-202ENST00000410080 PIK3R2O00459 728 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 PRKAB2O43741 272 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 FOSP01100 380 aaPredicted RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 TFRCP02786 760 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 MT-ND3P03897 115 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 CTTNQ14247 550 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 BZW1Q7L1Q6 419 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 TBCKQ8TEA7 893 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 WDR11Q9BZH6 1224 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 THEGQ9P2T0 379 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 MOCS2O96007 188 aaPredicted RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 MTMR1Q13613 665 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 CHCHD3Q9NX63 227 aaKnown RBP12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 CYP2D7A0A087X1C5 515 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 CCDC195A0A1B0GUA6 201 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 TADA2AO75478 443 aa12.01□□□□□ -0.49
PRPF40A-202ENST00000410080 SLCO1A2P46721 670 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms