RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 SIP14410 1827 aa21.43■■□□□ 1.02
PPM1B-207ENST00000409486 LOXHD1Q8IVV2 1947 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 C22orf31O95567 290 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 CHRNA1P02708 482 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 VTNP04004 478 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 PDCP20941 246 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 SYT1P21579 422 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 TRAPPC10P48553 1259 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 MRPS6P82932 125 aaKnown RBP21.42■■□□□ 1.02
PPM1B-207ENST00000409486 SPIRE1Q08AE8 756 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 PTGDRQ13258 359 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 MTIF3Q9H2K0 278 aaKnown RBP21.42■■□□□ 1.02
PPM1B-207ENST00000409486 CEP131Q9UPN4 1083 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 AKT3Q9Y243 479 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 COL1A2P08123 1366 aa21.42■■□□□ 1.02
PPM1B-207ENST00000409486 ZBTB39O15060 712 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 P4HBP07237 508 aaKnown RBP21.41■■□□□ 1.02
PPM1B-207ENST00000409486 NPEPPSP55786 919 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 RBL2Q08999 1139 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 TBC1D8BQ0IIM8 1120 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 TMEM266Q2M3C6 531 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 XKR3Q5GH77 459 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 EFCAB12Q6NXP0 572 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 INTS4Q96HW7 963 aaKnown RBP21.41■■□□□ 1.02
PPM1B-207ENST00000409486 SCLT1Q96NL6 688 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 SLC4A7Q9Y6M7 1214 aa21.41■■□□□ 1.02
PPM1B-207ENST00000409486 PFKMP08237 780 aa21.4■■□□□ 1.02
PPM1B-207ENST00000409486 TMCO2Q7Z6W1 182 aaPredicted RBP21.4■■□□□ 1.02
PPM1B-207ENST00000409486 HERVK_113Q902F9 699 aa21.4■■□□□ 1.02
PPM1B-207ENST00000409486 CCDC43Q96MW1 224 aaKnown RBP21.4■■□□□ 1.02
PPM1B-207ENST00000409486 RABGGTBP53611 331 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 ZRSR1Q15695 479 aaKnown RBP21.39■■□□□ 1.02
PPM1B-207ENST00000409486 RILPL1Q5EBL4 403 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 FAM117BQ6P1L5 589 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 FAM173BQ6P4H8 233 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 ZNF579Q8NAF0 562 aaKnown RBP21.39■■□□□ 1.02
PPM1B-207ENST00000409486 DBF4BQ8NFT6 615 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 CEP170P1Q96L14 293 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 FAM161BQ96MY7 647 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 TRPV2Q9Y5S1 764 aa21.39■■□□□ 1.02
PPM1B-207ENST00000409486 SMIM35A0A1B0GVV1 85 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 YWHABP31946 246 aaKnown RBP21.39■■□□□ 1.01
PPM1B-207ENST00000409486 KCNJ6P48051 423 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 CEBPZQ03701 1054 aaKnown RBP21.39■■□□□ 1.01
PPM1B-207ENST00000409486 KIZQ2M2Z5 673 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 XKR9Q5GH70 373 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 IER5Q5VY09 327 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 CNKSR3Q6P9H4 555 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 ANO5Q75V66 913 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 ZSWIM4Q9H7M6 989 aa21.39■■□□□ 1.01
PPM1B-207ENST00000409486 GBF1Q92538 1859 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 DKC1O60832 514 aaKnown RBP eCLIP21.38■■□□□ 1.01
PPM1B-207ENST00000409486 CAND2O75155 1236 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 STBD1O95210 358 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 MGAT3Q09327 533 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 LRIT3Q3SXY7 679 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 FOXD4L6Q3SYB3 417 aaPredicted RBP21.38■■□□□ 1.01
PPM1B-207ENST00000409486 FOXD4L3Q6VB84 417 aaPredicted RBP21.38■■□□□ 1.01
PPM1B-207ENST00000409486 KIAA0319LQ8IZA0 1049 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 C4orf32Q8N8J7 132 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 PIGOQ8TEQ8 1089 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 SEPT8Q92599 483 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 MAP7D2Q96T17 732 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 IFIH1Q9BYX4 1025 aaKnown RBP21.38■■□□□ 1.01
PPM1B-207ENST00000409486 CDHR5Q9HBB8 845 aa21.38■■□□□ 1.01
PPM1B-207ENST00000409486 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.38■■□□□ 1.01
PPM1B-207ENST00000409486 ARID2Q68CP9 1835 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 PP2D1A8MPX8 630 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 STX6O43752 255 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 SLITRK3O94933 977 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 PARNO95453 639 aaKnown RBP21.37■■□□□ 1.01
PPM1B-207ENST00000409486 ATP2A2P16615 1042 aaKnown RBP21.37■■□□□ 1.01
PPM1B-207ENST00000409486 TMOD1P28289 359 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 PBX2P40425 430 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 POLGP54098 1239 aaPredicted RBP21.37■■□□□ 1.01
PPM1B-207ENST00000409486 ORC2Q13416 577 aaPredicted RBP21.37■■□□□ 1.01
PPM1B-207ENST00000409486 DRP2Q13474 957 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 IKBKEQ14164 716 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 LPIN1Q14693 890 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 Q7L0L9 218 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 ERMNQ8TAM6 284 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 OSMRQ99650 979 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 CELF4Q9BZC1 486 aaKnown RBP21.37■■□□□ 1.01
PPM1B-207ENST00000409486 CYP26B1Q9NR63 512 aa21.37■■□□□ 1.01
PPM1B-207ENST00000409486 MAGEB2O15479 319 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 MED24O75448 989 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 CXCL10P02778 98 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 CDC25AP30304 524 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 CD52P31358 61 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 CCT6AP40227 531 aaKnown RBP21.36■■□□□ 1.01
PPM1B-207ENST00000409486 DEFB103AP81534 67 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 FAM26DQ5JW98 314 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 POTEGQ6S5H5 508 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 BRAPQ7Z569 592 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 NIFKQ9BYG3 293 aaKnown RBP21.36■■□□□ 1.01
PPM1B-207ENST00000409486 LRWD1Q9UFC0 647 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 MTMR6Q9Y217 621 aa21.36■■□□□ 1.01
PPM1B-207ENST00000409486 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.35■■□□□ 1.01
PPM1B-207ENST00000409486 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.35■■□□□ 1.01
PPM1B-207ENST00000409486 VWA3AA6NCI4 1184 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms