RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 LYPLA2O95372 231 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 ABL1P00519 1130 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 YWHABP31946 246 aaKnown RBP22.76■■□□□ 1.23
USP39-203ENST00000409470 RARRES1P49788 294 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 KIAA1328Q86T90 577 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 METTL14Q9HCE5 456 aaKnown RBP22.76■■□□□ 1.23
USP39-203ENST00000409470 PCDHB13Q9Y5F0 798 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 ZMYM2Q9UBW7 1377 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 EIF3CLB5ME19 914 aaKnown RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 CCNE2O96020 404 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 XRCC5P13010 732 aaKnown RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 PSMC5P62195 406 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 HERVK_113P62684 666 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 PPP2R3AQ06190 1150 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 C9orf131Q5VYM1 1079 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 KSR1Q8IVT5 923 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 MNS1Q8NEH6 495 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 CNKSR2Q8WXI2 1034 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 BAP1Q92560 729 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 EIF3CQ99613 913 aaKnown RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 SYT17Q9BSW7 474 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 CEP72Q9P209 647 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 WDR90Q96KV7 1748 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 MAFGO15525 162 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 IREB2P48200 963 aaKnown RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 MAPK7Q13164 816 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 UGCGQ16739 394 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 DCAF17Q5H9S7 520 aaPredicted RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 TREML2Q5T2D2 321 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 PDXDC1Q6P996 788 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 HS2ST1Q7LGA3 356 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 TRMT1LQ7Z2T5 733 aaKnown RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 MTERF4Q7Z6M4 381 aaKnown RBP22.75■■□□□ 1.23
USP39-203ENST00000409470 C4orf19Q8IY42 314 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 DAW1Q8N136 415 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 NLRC4Q9NPP4 1024 aa22.75■■□□□ 1.23
USP39-203ENST00000409470 USO1O60763 962 aaKnown RBP22.74■■□□□ 1.23
USP39-203ENST00000409470 AFPP02771 609 aaKnown RBP22.74■■□□□ 1.23
USP39-203ENST00000409470 CASP4P49662 377 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 SLC35F6Q8N357 371 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 INPP4AQ96PE3 977 aaPredicted RBP22.74■■□□□ 1.23
USP39-203ENST00000409470 IKZF4Q9H2S9 585 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 DEF6Q9H4E7 631 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 HAUS4Q9H6D7 363 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 LARSQ9P2J5 1176 aaKnown RBP22.74■■□□□ 1.23
USP39-203ENST00000409470 MYO1AQ9UBC5 1043 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 GUCA1BQ9UMX6 200 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 MYH11P35749 1972 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 PLEKP08567 350 aaPredicted RBP22.74■■□□□ 1.23
USP39-203ENST00000409470 YBX3P16989 372 aaKnown RBP eCLIP22.74■■□□□ 1.236e-7■■□□□ 12.2
USP39-203ENST00000409470 TCERG1LQ5VWI1 586 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 ZNF746Q6NUN9 644 aaPredicted RBP22.74■■□□□ 1.23
USP39-203ENST00000409470 ARHGAP20Q9P2F6 1191 aa22.74■■□□□ 1.23
USP39-203ENST00000409470 K7ENM7 598 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 NOL4O94818 638 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 POLR2FP61218 127 aaKnown RBP22.73■■□□□ 1.23
USP39-203ENST00000409470 SPA17Q15506 151 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 CCDC122Q5T0U0 273 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 UTP14CQ5TAP6 766 aaKnown RBP22.73■■□□□ 1.23
USP39-203ENST00000409470 GADL1Q6ZQY3 521 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 SYCP3Q8IZU3 236 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 LRRN4CLQ8ND94 238 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 RDM1Q8NG50 284 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 MAP7D2Q96T17 732 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 SH2D3AQ9BRG2 576 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 CARD6Q9BX69 1037 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 MOV10L1Q9BXT6 1211 aaKnown RBP22.73■■□□□ 1.23
USP39-203ENST00000409470 GBP3Q9H0R5 595 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 NUCKS1Q9H1E3 243 aaKnown RBP22.73■■□□□ 1.23
USP39-203ENST00000409470 TRIM10Q9UDY6 481 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 MRFAP1Q9Y605 127 aa22.73■■□□□ 1.23
USP39-203ENST00000409470 CTAGE9A4FU28 777 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 NFIL3Q16649 462 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 CHST13Q8NET6 341 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 JAKMIP2Q96AA8 810 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 CDHR1Q96JP9 859 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 MAF1Q9H063 256 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 ELP3Q9H9T3 547 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 PCDHA10Q9Y5I2 948 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 TMEM150BA6NC51 233 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 BACH1O14867 736 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 PSMC2P35998 433 aaKnown RBP22.72■■□□□ 1.23
USP39-203ENST00000409470 EIF4A3P38919 411 aaKnown RBP22.72■■□□□ 1.23
USP39-203ENST00000409470 ELF2Q15723 593 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 XKR9Q5GH70 373 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 GPIHBP1Q8IV16 184 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 FAM186BQ8IYM0 893 aa22.72■■□□□ 1.23
USP39-203ENST00000409470 STAM2O75886 525 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 CYP27A1Q02318 531 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 GNPTABQ3T906 1256 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 SFMBT2Q5VUG0 894 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 DPY19L2Q6NUT2 758 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 ANKRD35Q8N283 1001 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 GOLGA5Q8TBA6 731 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 OTUD5Q96G74 571 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 SENP7Q9BQF6 1050 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 AGPAT3Q9NRZ7 376 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 TFR2Q9UP52 801 aa22.71■■□□□ 1.23
USP39-203ENST00000409470 KRT86O43790 486 aa22.7■■□□□ 1.23
USP39-203ENST00000409470 AKR1B10O60218 316 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms