RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FAM26DQ5JW98 314 aa22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 ZNF365Q70YC5 407 aa22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 SPRYD3Q8NCJ5 442 aa22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 FAM49AQ9H0Q0 323 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 ZSCAN16Q9H4T2 348 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 NBNO60934 754 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 LYPLA2O95372 231 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 FGBP02675 491 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 CTSHP09668 335 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 BECN1Q14457 450 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 MBTPS1Q14703 1052 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 KIAA0319LQ8IZA0 1049 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 NME8Q8N427 588 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 ERMNQ8TAM6 284 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 RAB34Q9BZG1 259 aa22.23■■□□□ 1.15
PDLIM2-207ENST00000409417 TMEM150BA6NC51 233 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 BMP15O95972 392 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 CHRNA1P02708 482 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 CXCL10P02778 98 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 YWHABP31946 246 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 TBC1D8BQ0IIM8 1120 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 DTHD1Q6ZMT9 781 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 METTL13Q8N6R0 699 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 IGSF22Q8N9C0 903 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 FTOQ9C0B1 505 aaKnown RBP eCLIP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 LAMA2P24043 3122 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 SPATA31C1P0DKV0 1188 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 MRPS6P82932 125 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 IL17AQ16552 155 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 MTERF2Q49AM1 385 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 IER5Q5VY09 327 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 ARL6IP4Q66PJ3 421 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 OTUD6AQ7L8S5 288 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 RNPC3Q96LT9 517 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 CEP89Q96ST8 783 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 POLR3CQ9BUI4 534 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 TUFT1Q9NNX1 390 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 CYP26B1Q9NR63 512 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 PPME1Q9Y570 386 aa22.22■■□□□ 1.15
PDLIM2-207ENST00000409417 TANC1Q9C0D5 1861 aa22.21■■□□□ 1.15
PDLIM2-207ENST00000409417 RASIP1Q5U651 963 aa22.21■■□□□ 1.15
PDLIM2-207ENST00000409417 CATSPER3Q86XQ3 398 aa22.21■■□□□ 1.15
PDLIM2-207ENST00000409417 HERVK_113Q902F9 699 aa22.21■■□□□ 1.15
PDLIM2-207ENST00000409417 SH2D3AQ9BRG2 576 aa22.21■■□□□ 1.15
PDLIM2-207ENST00000409417 LRWD1Q9UFC0 647 aa22.21■■□□□ 1.15
PDLIM2-207ENST00000409417 RPA1P27694 616 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 TMOD1P28289 359 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 MGAT3Q09327 533 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 LRIT3Q3SXY7 679 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 HAUS3Q68CZ6 603 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 PLA2G4FQ68DD2 849 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 EFCAB12Q6NXP0 572 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 OTOP2Q7RTS6 562 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 LINC01465Q8N7H1 131 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 CEP170P1Q96L14 293 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 MTIF3Q9H2K0 278 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 STK24Q9Y6E0 443 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 CDY2AQ9Y6F7 541 aa22.2■■□□□ 1.14
PDLIM2-207ENST00000409417 M0QZ92 97 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 ZBTB39O15060 712 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 MED24O75448 989 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 ACTN1P12814 892 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 XRCC6P12956 609 aaKnown RBP eCLIP22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 NPEPPSP55786 919 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 SCN5AQ14524 2016 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 SF3A1Q15459 793 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 FAM173BQ6P4H8 233 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 SUGCTQ9HAC7 445 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 ANKEF1Q9NU02 776 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 TET1Q8NFU7 2136 aa22.19■■□□□ 1.14
PDLIM2-207ENST00000409417 IGKV6-21A0A0C4DH24 114 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 MAFO75444 373 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 ZSCAN22P10073 491 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 MUTP22033 750 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 CLCN3P51790 818 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 TMEM62Q0P6H9 643 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 EXOC8Q8IYI6 725 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 MAP7D2Q96T17 732 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 JPH2Q9BR39 696 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 CELF4Q9BZC1 486 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 TRPV2Q9Y5S1 764 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 KDM3AQ9Y4C1 1321 aa22.18■■□□□ 1.14
PDLIM2-207ENST00000409417 CCT6AP40227 531 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 PLEKHG4Q58EX7 1191 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 XKR9Q5GH70 373 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 CNKSR3Q6P9H4 555 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 ZNF710Q8N1W2 664 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 LRRC71Q8N4P6 559 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 ZNF579Q8NAF0 562 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 SLC7A3Q8WY07 619 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 NACC1Q96RE7 527 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 OSBPL7Q9BZF2 842 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 CXXC1Q9P0U4 656 aaPredicted RBP22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 CLIC4Q9Y696 253 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 SQORQ9Y6N5 450 aa22.17■■□□□ 1.14
PDLIM2-207ENST00000409417 VWA3AA6NCI4 1184 aa22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 BAIAP3O94812 1187 aa22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 RFC5P40937 340 aa22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 DNM2P50570 870 aa22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 FBXO47Q5MNV8 452 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms