RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
PCDH20-201ENST00000409204 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
PCDH20-201ENST00000409204 AGXT2Q9BYV1 514 aa13.12□□□□□ -0.31
PCDH20-201ENST00000409204 RPF1Q9H9Y2 349 aaKnown RBP13.12□□□□□ -0.31
PCDH20-201ENST00000409204 RIC1Q4ADV7 1423 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 GOLGA8SH3BPF8 625 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 MAP7Q14244 749 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 WDR64B1ANS9 1081 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 SRGAP2CP0DJJ0 459 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 KRT76Q01546 638 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ORC2Q13416 577 aaPredicted RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 PRPSAP1Q14558 356 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 C10orf67Q8IYJ2 551 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 PPP4R1Q8TF05 950 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 IPO11Q9UI26 975 aaKnown RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 HSPA6P17066 643 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 MTMR1Q13613 665 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 USP49Q70CQ1 688 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 CATSPER4Q7RTX7 472 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 PRPF38AQ8NAV1 312 aaKnown RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 RILPQ96NA2 401 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ABCB11O95342 1321 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 INPP5BP32019 993 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 SEC23AQ15436 765 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ZBTB33Q86T24 672 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 CCDC170Q8IYT3 715 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 UBE2TQ9NPD8 197 aaPredicted RBP13.11□□□□□ -0.31
PCDH20-201ENST00000409204 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
PCDH20-201ENST00000409204 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 HGSO14964 777 aaPredicted RBP13.1□□□□□ -0.31
PCDH20-201ENST00000409204 ARL4AP40617 200 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 HDLBPQ00341 1268 aaKnown RBP13.1□□□□□ -0.31
PCDH20-201ENST00000409204 RBL2Q08999 1139 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 RFX6Q8HWS3 928 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 NEK9Q8TD19 979 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 MAD1L1Q9Y6D9 718 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 PEX3P56589 373 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 APBA1Q02410 837 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
PCDH20-201ENST00000409204 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 ARHGEF2Q92974 986 aaKnown RBP13.1□□□□□ -0.31
PCDH20-201ENST00000409204 GFPT2O94808 682 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 TTC31Q49AM3 519 aaPredicted RBP13.1□□□□□ -0.31
PCDH20-201ENST00000409204 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 SLC35F6Q8N357 371 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 FAM49AQ9H0Q0 323 aaPredicted RBP13.1□□□□□ -0.31
PCDH20-201ENST00000409204 RNF14Q9UBS8 474 aa13.1□□□□□ -0.31
PCDH20-201ENST00000409204 GNAT1P11488 350 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 OSTNP61366 133 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 PIGOQ8TEQ8 1089 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 RASSF2P50749 326 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 ZDHHC15Q96MV8 337 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 BCAP29Q9UHQ4 241 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 PRELPP51888 382 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 FAM133AQ8N9E0 248 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 MGARPQ8TDB4 240 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 FAM114A2Q9NRY5 505 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 E9PMD0 336 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 STXBP3O00186 592 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 XPAP23025 273 aaPredicted RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 GMPSP49915 693 aaPredicted RBP13.09□□□□□ -0.31
PCDH20-201ENST00000409204 GUCY2DQ02846 1103 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 SIX6OS1Q8N1H7 587 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
PCDH20-201ENST00000409204 CPSF3Q9UKF6 684 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms