RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 KIAA0319LQ8IZA0 1049 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 METTL13Q8N6R0 699 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 TIFAQ96CG3 184 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 FAM161BQ96MY7 647 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 SLC9A7Q96T83 725 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 NOL7Q9UMY1 257 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 DDX11L8A8MPP1 907 aa20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 P4HBP07237 508 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 GHRP10912 638 aa20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 QARSP47897 775 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 RABGGTBP53611 331 aa20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 TTC38Q5R3I4 469 aa20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 MTMR9Q96QG7 549 aa20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 IFIH1Q9BYX4 1025 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 CELF4Q9BZC1 486 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 TTC12Q9H892 705 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 TRPV2Q9Y5S1 764 aa20.15■□□□□ 0.82
PDLIM2-206ENST00000409141 DKC1O60832 514 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 TRAPPC10P48553 1259 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 SPIRE1Q08AE8 756 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 LPIN1Q14693 890 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 FBXO47Q5MNV8 452 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 NIFKQ9BYG3 293 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 TMEM60Q9H2L4 133 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 SEMA6BQ9H3T3 888 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 MTMR10Q9NXD2 777 aa20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 SEPT9Q9UHD8 586 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-206ENST00000409141 TMEM265A0A087WTH1 108 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 STBD1O95210 358 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 ORC2Q13416 577 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 CUL4AQ13619 759 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 MTERF2Q49AM1 385 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 LARP1BQ659C4 914 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 EFCAB12Q6NXP0 572 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 HERC6Q8IVU3 1022 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 APBB2Q92870 758 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 TTYH1Q9H313 450 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 RGL1Q9NZL6 768 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 GINS2Q9Y248 185 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 PCDHA11Q9Y5I1 949 aa20.13■□□□□ 0.81
PDLIM2-206ENST00000409141 LAMA2P24043 3122 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 TMEM150BA6NC51 233 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 TMOD1P28289 359 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 DEFB103AP81534 67 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 TBC1D8BQ0IIM8 1120 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 TARBP2Q15633 366 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 DYDC2Q96IM9 177 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 ZBED2Q9BTP6 218 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 SUGCTQ9HAC7 445 aa20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 YBX2Q9Y2T7 364 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-206ENST00000409141 MYOGP15173 224 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 CLCN3P51790 818 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 CYP4A11Q02928 519 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 CTTNQ14247 550 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 TSHZ1Q6ZSZ6 1077 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 ANO5Q75V66 913 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 TMCO2Q7Z6W1 182 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 TPH2Q8IWU9 490 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 LRRC71Q8N4P6 559 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 MAP7D2Q96T17 732 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 EIF2AK1Q9BQI3 630 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 SH2D3AQ9BRG2 576 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 LXNQ9BS40 222 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 ZNF576Q9H609 170 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 SLC28A3Q9HAS3 691 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 SQORQ9Y6N5 450 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 KDM3AQ9Y4C1 1321 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 WDR81Q562E7 1941 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 AMHP03971 560 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 VTNP04004 478 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 NBR1Q14596 966 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 C4orf19Q8IY42 314 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 PPP1R16BQ96T49 567 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 ZSWIM4Q9H7M6 989 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 AGO3Q9H9G7 860 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 CDHR5Q9HBB8 845 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 WRAP73Q9P2S5 460 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 AKT3Q9Y243 479 aa20.11■□□□□ 0.81
PDLIM2-206ENST00000409141 TLL1O43897 1013 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 SLITRK3O94933 977 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 OR52Z1P0C646 297 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 CD52P31358 61 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 TOB1P50616 345 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 KIZQ2M2Z5 673 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 MYOCDQ8IZQ8 938 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 LINC01465Q8N7H1 131 aa20.1■□□□□ 0.81
PDLIM2-206ENST00000409141 EVPLQ92817 2033 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 K7ELQ4 463 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 TECP42680 631 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 DNM2P50570 870 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 NPEPPSP55786 919 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 PLA2G4FQ68DD2 849 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 FAM117BQ6P1L5 589 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 OTUD6AQ7L8S5 288 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 CEP170P1Q96L14 293 aa20.09■□□□□ 0.81
PDLIM2-206ENST00000409141 CEP89Q96ST8 783 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms