RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 ASCC2Q9H1I8 757 aaPredicted RBP20.89■□□□□ 0.93
USP39-202ENST00000409025 ZNHIT6Q9NWK9 470 aaKnown RBP20.89■□□□□ 0.93
USP39-202ENST00000409025 MYH11P35749 1972 aa20.89■□□□□ 0.93
USP39-202ENST00000409025 UTRNP46939 3433 aa20.89■□□□□ 0.93
USP39-202ENST00000409025 ASTN1O14525 1302 aa20.89■□□□□ 0.93
USP39-202ENST00000409025 ETF1P62495 437 aaKnown RBP20.88■□□□□ 0.93
USP39-202ENST00000409025 STXBP2Q15833 593 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 UGCGQ16739 394 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 SYT10Q6XYQ8 523 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 FRMD5Q7Z6J6 570 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 PNMA8AQ86V59 439 aaPredicted RBP20.88■□□□□ 0.93
USP39-202ENST00000409025 SMAP1Q8IYB5 467 aaPredicted RBP20.88■□□□□ 0.93
USP39-202ENST00000409025 OPTNQ96CV9 577 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 FIZ1Q96SL8 496 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 ANKEF1Q9NU02 776 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 AGPAT5Q9NUQ2 364 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 PCDHB13Q9Y5F0 798 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 LCTP09848 1927 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 SPATA31C2B4DYI2 1134 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 NR3C1P04150 777 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 HERVK_113P62684 666 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 MAPK7Q13164 816 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 FASTKD5Q7L8L6 764 aaKnown RBP20.88■□□□□ 0.93
USP39-202ENST00000409025 NCAPG2Q86XI2 1143 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 TIPINQ9BVW5 301 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 MMRN2Q9H8L6 949 aa20.88■□□□□ 0.93
USP39-202ENST00000409025 PEX10O60683 326 aa20.87■□□□□ 0.93
USP39-202ENST00000409025 DKC1O60832 514 aaKnown RBP eCLIP20.87■□□□□ 0.93
USP39-202ENST00000409025 ZC2HC1CQ53FD0 456 aaPredicted RBP20.87■□□□□ 0.93
USP39-202ENST00000409025 DAW1Q8N136 415 aa20.87■□□□□ 0.93
USP39-202ENST00000409025 JPH1Q9HDC5 661 aaPredicted RBP20.87■□□□□ 0.93
USP39-202ENST00000409025 LARSQ9P2J5 1176 aaKnown RBP20.87■□□□□ 0.93
USP39-202ENST00000409025 SLC16A3O15427 465 aaKnown RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 USO1O60763 962 aaKnown RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 EIF3JO75822 258 aaKnown RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 GTF2F1P35269 517 aaKnown RBP eCLIP20.86■□□□□ 0.93
USP39-202ENST00000409025 CNTN2Q02246 1040 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 KCNA1Q09470 495 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 TRIM65Q6PJ69 517 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 CHP1Q99653 195 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 FAM207AQ9NSI2 230 aaPredicted RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 SLC9A2Q9UBY0 812 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 ARMCX3Q9UH62 379 aaPredicted RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 ZMYM2Q9UBW7 1377 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 TGFB1I1O43294 461 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 PSAPP07602 524 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 MAPTP10636 758 aaKnown RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 OSBPP22059 807 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 ALDH5A1P51649 535 aaPredicted RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 PPP2R3AQ06190 1150 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 MEA1Q16626 185 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 NFIL3Q16649 462 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 XKR9Q5GH70 373 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 MAEAQ7L5Y9 396 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 NEK11Q8NG66 645 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 ATP6V0A1Q93050 837 aa20.86■□□□□ 0.93
USP39-202ENST00000409025 METTL14Q9HCE5 456 aaKnown RBP20.86■□□□□ 0.93
USP39-202ENST00000409025 PHLPP2Q6ZVD8 1323 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 POTEB2H3BUK9 544 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 BACH1O14867 736 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 SLC25A27O95847 323 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 EPB41P11171 864 aaKnown RBP20.85■□□□□ 0.93
USP39-202ENST00000409025 WDR59Q6PJI9 974 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 HS2ST1Q7LGA3 356 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 SMCR8Q8TEV9 937 aaPredicted RBP20.85■□□□□ 0.93
USP39-202ENST00000409025 EDEM3Q9BZQ6 932 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 DNAI1Q9UI46 699 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 CLEC11AQ9Y240 323 aa20.85■□□□□ 0.93
USP39-202ENST00000409025 DYNC1I1O14576 645 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 CLIC2O15247 247 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 CNMDO75829 334 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 ICAM3P32942 547 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 COPB2P35606 906 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 KCNMA1Q12791 1236 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 ALCAMQ13740 583 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 LDLRAD1Q5T700 205 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 UTP14CQ5TAP6 766 aaKnown RBP20.84■□□□□ 0.93
USP39-202ENST00000409025 OTUD6AQ7L8S5 288 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 DRC1Q96MC2 740 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 GABBR1Q9UBS5 961 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 EPN1Q9Y6I3 576 aaPredicted RBP20.84■□□□□ 0.93
USP39-202ENST00000409025 K7ENM7 598 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 PLS3P13797 630 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 KCNH2Q12809 1159 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 MOGSQ13724 837 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 CCDC155Q8N6L0 562 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 GOLGA5Q8TBA6 731 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 STRA6Q9BX79 667 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 GBP3Q9H0R5 595 aa20.84■□□□□ 0.93
USP39-202ENST00000409025 TMEM150BA6NC51 233 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 AKAP3O75969 853 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 NDUFA10O95299 355 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 ACTR2P61160 394 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 CDK17Q00537 523 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 PLA2G4FQ68DD2 849 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 TRMT1LQ7Z2T5 733 aaKnown RBP20.83■□□□□ 0.93
USP39-202ENST00000409025 KSR1Q8IVT5 923 aa20.83■□□□□ 0.93
USP39-202ENST00000409025 ACRBPQ8NEB7 543 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms