RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 IQCDQ96DY2 449 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 MYMKA6NI61 221 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 MARK3P27448 753 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 SHMT1P34896 483 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 SLCO1A2P46721 670 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 CXCL9Q07325 125 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 NEDD9Q14511 834 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 KCTD19Q17RG1 926 aaPredicted RBP17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 PAPD7Q5XG87 772 aaKnown RBP17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 NUCKS1Q9H1E3 243 aaKnown RBP17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 CHUKO15111 745 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 TNNI1P19237 187 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 PPM1KQ8N3J5 372 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 MTRF1LQ9UGC7 380 aaKnown RBP17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 ANKRD42Q8N9B4 389 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 IFT74Q96LB3 600 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 SEPT9Q9UHD8 586 aaPredicted RBP17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 H2AFZP0C0S5 128 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 H2AFVQ71UI9 128 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 MICAL1Q8TDZ2 1067 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 ANKFY1Q9P2R3 1169 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 RCCD1A6NED2 376 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 TMOD1P28289 359 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 PEX19P40855 299 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 SNRNP48Q6IEG0 339 aaKnown RBP17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 PHLDB2Q86SQ0 1253 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 VTI1AQ96AJ9 217 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 CXorf56Q9H5V9 222 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 CD248Q9HCU0 757 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
CCDC85A-201ENST00000407595 PLTPP55058 493 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 COASYQ13057 564 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 DENND2CQ68D51 928 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 PROM2Q8N271 834 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 WHAMMQ8TF30 809 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 ZNF473Q8WTR7 871 aaKnown RBP17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 CEP170P1Q96L14 293 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 AS3MTQ9HBK9 375 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 RIC8AQ9NPQ8 531 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 AMFRQ9UKV5 643 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 A0A1W2PRG0 241 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 ANKRD62A6NC57 917 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 HMGB1P1B2RPK0 211 aaPredicted RBP17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 HOOK3Q86VS8 718 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 ATP6V1G3Q96LB4 118 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 DNAJC7Q99615 494 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 IVNS1ABPQ9Y6Y0 642 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 RNF207Q6ZRF8 634 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 MYL1P05976 194 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 MAGOHP61326 146 aaKnown RBP17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 ADCY1Q08828 1119 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 PDXDC2PQ6P474 469 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 RAD54LQ92698 747 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 MAGOHBQ96A72 148 aaKnown RBP17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 MRRFQ96E11 262 aaKnown RBP17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 KLC4Q9NSK0 619 aa17.04■□□□□ 0.32
CCDC85A-201ENST00000407595 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 HOXA10P31260 410 aaPredicted RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 PEX3P56589 373 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 RNF146Q9NTX7 359 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 REXO2Q9Y3B8 237 aaKnown RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 CALCOCO2Q13137 446 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 TMED8Q6PL24 325 aaPredicted RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 UNC13DQ70J99 1090 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 SYNCQ9H7C4 482 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 CTTNBP2NLQ9P2B4 639 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 RNF14Q9UBS8 474 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 PDS5AQ29RF7 1337 aaKnown RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 PGRMC1O00264 195 aaKnown RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 IPO5O00410 1097 aaKnown RBP17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 SERPING1P05155 500 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 CCDC63Q8NA47 563 aa17.03■□□□□ 0.32
CCDC85A-201ENST00000407595 GIMAP8Q8ND71 665 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms