RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 COL1A2P08123 1366 aa18.79■□□□□ 0.6
HMGA1P7-201ENST00000406908 CLTBP09497 229 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 XRCC6P12956 609 aaKnown RBP eCLIP18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 MUTP22033 750 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 UBA7P41226 1012 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 GRB10Q13322 594 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 MTERF2Q49AM1 385 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 MTHFD1LQ6UB35 978 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 SERINC5Q86VE9 423 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 DHX38Q92620 1227 aaKnown RBP18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 WNT8BQ93098 351 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 SPATA32Q96LK8 384 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 NACC1Q96RE7 527 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 PLIN2Q99541 437 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 CCSER1Q9C0I3 900 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 GDPD2Q9HCC8 539 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 PDLIM7Q9NR12 457 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 TMEM39AQ9NV64 488 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 TUBE1Q9UJT0 475 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 TBX21Q9UL17 535 aa18.78■□□□□ 0.6
HMGA1P7-201ENST00000406908 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 CUTAO60888 179 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 PTK7Q13308 1070 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 XKR9Q5GH70 373 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 HYIQ5T013 277 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 RUFY4Q6ZNE9 571 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 OTUD6AQ7L8S5 288 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 TRIM43Q96BQ3 446 aaPredicted RBP18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 SCAND2PQ9GZW5 306 aaPredicted RBP18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 CYP26B1Q9NR63 512 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 ANKEF1Q9NU02 776 aa18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 DDX19AQ9NUU7 478 aaKnown RBP18.77■□□□□ 0.6
HMGA1P7-201ENST00000406908 KIAA0355O15063 1070 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 C22orf31O95567 290 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 ME1P48163 572 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 RARRES1P49788 294 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 TRIM71Q2Q1W2 868 aaKnown RBP18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 SHC4Q6S5L8 630 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 KCNK18Q7Z418 384 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 SYMPKQ92797 1274 aaKnown RBP18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 CEP170P1Q96L14 293 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 PRDM5Q9NQX1 630 aaPredicted RBP18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 PCDHA2Q9Y5H9 948 aa18.76■□□□□ 0.59
HMGA1P7-201ENST00000406908 E9PMD0 336 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 MAGEB2O15479 319 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 SLC26A4O43511 780 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 ITGB8P26012 769 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 MLLT1Q03111 559 aaPredicted RBP18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 KARSQ15046 597 aaKnown RBP18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 LRRC15Q8TF66 581 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 DNAJB3Q8WWF6 145 aa18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 DBR1Q9UK59 544 aaKnown RBP18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
HMGA1P7-201ENST00000406908 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 SYN1P17600 705 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 TBC1D8BQ0IIM8 1120 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 TAF2Q6P1X5 1199 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 KIAA0319LQ8IZA0 1049 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 CALML4Q96GE6 196 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 CDK5RAP3Q96JB5 506 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 PPP1R12CQ9BZL4 782 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 DNM3Q9UQ16 869 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 NR2E3Q9Y5X4 410 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 EVPLQ92817 2033 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
HMGA1P7-201ENST00000406908 SMIM35A0A1B0GVV1 85 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 MAFO75444 373 aaPredicted RBP18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 EYA4O95677 639 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 CYP2C18P33260 490 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 EFCAB12Q6NXP0 572 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 RPAINQ86UA6 219 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 LRRC71Q8N4P6 559 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 METTL13Q8N6R0 699 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 LINC01465Q8N7H1 131 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 NT5C3AQ9H0P0 336 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 FAM49AQ9H0Q0 323 aaPredicted RBP18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 BHMT2Q9H2M3 363 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 HIPK3Q9H422 1215 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 DHX33Q9H6R0 707 aaKnown RBP18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 SUGCTQ9HAC7 445 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 PPME1Q9Y570 386 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 DNAH12Q6ZR08 3092 aa18.73■□□□□ 0.59
HMGA1P7-201ENST00000406908 A0A087X0B3 334 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 TIMP1P01033 207 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 CKBP12277 381 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 RAG1P15918 1043 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 PLCG1P19174 1290 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 THPOP40225 353 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 RFC5P40937 340 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 CLCN3P51790 818 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 RBL2Q08999 1139 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 DRP2Q13474 957 aa18.72■□□□□ 0.59
HMGA1P7-201ENST00000406908 BFSP2Q13515 415 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms