RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SH2D3AQ9BRG2 576 aa17.82■□□□□ 0.44
GDPD3-202ENST00000406256 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
GDPD3-202ENST00000406256 CLIC4Q9Y696 253 aa17.82■□□□□ 0.44
GDPD3-202ENST00000406256 SMIM35A0A1B0GVV1 85 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 CAND2O75155 1236 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 CHRNA1P02708 482 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 CXCL10P02778 98 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
GDPD3-202ENST00000406256 ACRP10323 421 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 THPOP40225 353 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
GDPD3-202ENST00000406256 ECM1Q16610 540 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 PLA2G4FQ68DD2 849 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 KIAA0319LQ8IZA0 1049 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 DNAJB3Q8WWF6 145 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 MMTAG2Q9BU76 263 aaKnown RBP17.81■□□□□ 0.44
GDPD3-202ENST00000406256 UBE2OQ9C0C9 1292 aaKnown RBP17.81■□□□□ 0.44
GDPD3-202ENST00000406256 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 CHD7Q9P2D1 2997 aa17.81■□□□□ 0.44
GDPD3-202ENST00000406256 IGKV6-21A0A0C4DH24 114 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 PP2D1A8MPX8 630 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 CTSHP09668 335 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 ZSCAN22P10073 491 aaPredicted RBP17.8■□□□□ 0.44
GDPD3-202ENST00000406256 NPEPPSP55786 919 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 GRIN1Q05586 938 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 PPIGQ13427 754 aaKnown RBP eCLIP17.8■□□□□ 0.44
GDPD3-202ENST00000406256 MKRN4PQ13434 485 aaPredicted RBP17.8■□□□□ 0.44
GDPD3-202ENST00000406256 SHHQ15465 462 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 CATSPER3Q86XQ3 398 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 NEK9Q8TD19 979 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
GDPD3-202ENST00000406256 USP28Q96RU2 1077 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 ZSCAN16Q9H4T2 348 aaPredicted RBP17.8■□□□□ 0.44
GDPD3-202ENST00000406256 ZSWIM4Q9H7M6 989 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 NRBP2Q9NSY0 501 aa17.8■□□□□ 0.44
GDPD3-202ENST00000406256 SEPT9Q9UHD8 586 aaPredicted RBP17.8■□□□□ 0.44
GDPD3-202ENST00000406256 F13A1P00488 732 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 DDIT3P35638 169 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 PDIA5Q14554 519 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 MTERF2Q49AM1 385 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 ARL6IP4Q66PJ3 421 aaKnown RBP17.79■□□□□ 0.44
GDPD3-202ENST00000406256 RETREG2Q8NC44 543 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
GDPD3-202ENST00000406256 FAM49AQ9H0Q0 323 aaPredicted RBP17.79■□□□□ 0.44
GDPD3-202ENST00000406256 CEP131Q9UPN4 1083 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 A0A087WWV3 80 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 DDX11L8A8MPP1 907 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 RSPH10B2B2RC85 870 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 BRD1O95696 1058 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 RSPH10BP0C881 870 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 RPA1P27694 616 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 CDC25AP30304 524 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 YWHABP31946 246 aaKnown RBP17.79■□□□□ 0.44
GDPD3-202ENST00000406256 RFC2P35250 354 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 DRP2Q13474 957 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 ZNF365Q70YC5 407 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 TPH2Q8IWU9 490 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 TDHQ8IZJ6 230 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 LRRC71Q8N4P6 559 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 TUFT1Q9NNX1 390 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 CYP26B1Q9NR63 512 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 LRWD1Q9UFC0 647 aa17.79■□□□□ 0.44
GDPD3-202ENST00000406256 A0A1W2PPC1 479 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 MAFO75444 373 aaPredicted RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 CLCN3P51790 818 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 MRPS6P82932 125 aaKnown RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 TMEM266Q2M3C6 531 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 FOXD4L5Q5VV16 416 aaPredicted RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 POTEGQ6S5H5 508 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 DTHD1Q6ZMT9 781 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 DEFB128Q7Z7B8 93 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 FOXD4L4Q8WXT5 416 aaPredicted RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 DHX33Q9H6R0 707 aaKnown RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 CXXC1Q9P0U4 656 aaPredicted RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 CDY2AQ9Y6F7 541 aa17.78■□□□□ 0.44
GDPD3-202ENST00000406256 MORC2Q9Y6X9 1032 aaPredicted RBP17.78■□□□□ 0.44
GDPD3-202ENST00000406256 KDM3AQ9Y4C1 1321 aa17.77■□□□□ 0.44
GDPD3-202ENST00000406256 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 MAGEB2O15479 319 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 DKC1O60832 514 aaKnown RBP eCLIP17.77■□□□□ 0.43
GDPD3-202ENST00000406256 NASPP49321 788 aaPredicted RBP17.77■□□□□ 0.43
GDPD3-202ENST00000406256 TMEM62Q0P6H9 643 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 BECN1Q14457 450 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 CDHR5Q9HBB8 845 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 XPNPEP1Q9NQW7 623 aa17.77■□□□□ 0.43
GDPD3-202ENST00000406256 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.43
GDPD3-202ENST00000406256 GPR32O75388 356 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
GDPD3-202ENST00000406256 BMP15O95972 392 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 PFKMP08237 780 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
GDPD3-202ENST00000406256 RARRES1P49788 294 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 TBC1D8BQ0IIM8 1120 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 LPIN1Q14693 890 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 PLEKHG4Q58EX7 1191 aa17.76■□□□□ 0.43
GDPD3-202ENST00000406256 HABP4Q5JVS0 413 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms