RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 KLHDC7AQ5VTJ3 777 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 SRLQ86TD4 932 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 TRIM59Q8IWR1 403 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 LARGE2Q8N3Y3 721 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 RNF10Q8N5U6 811 aaKnown RBP8.4□□□□□ -1.07
HDAC9-201ENST00000401921 CEP120Q8N960 986 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 FAM212AQ96EL1 285 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 FAM20AQ96MK3 541 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 TLR10Q9BXR5 811 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 DNAJC18Q9H819 358 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 METTL14Q9HCE5 456 aaKnown RBP8.4□□□□□ -1.07
HDAC9-201ENST00000401921 DONSONQ9NYP3 566 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.4□□□□□ -1.07
HDAC9-201ENST00000401921 KRIT1O00522 736 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 AKAP3O75969 853 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 MYCLP12524 364 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 HSPA1LP34931 641 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 CETN1Q12798 172 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 STRIP1Q5VSL9 837 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 BCAS4Q8TDM0 211 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 UBLCP1Q8WVY7 318 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 CTNNBL1Q8WYA6 563 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 ZDHHC15Q96MV8 337 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 EDEM3Q9BZQ6 932 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 DPH5Q9H2P9 285 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 EML1O00423 815 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 EDIL3O43854 480 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 PSMC2P35998 433 aaKnown RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 IFFO1Q0D2I5 559 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 PPFIA1Q13136 1202 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 SYT2Q8N9I0 419 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 CHURC1Q8WUH1 139 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 AHDC1Q5TGY3 1603 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 IGKV6D-41A0A0C4DH26 115 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 DCAF8L1A6NGE4 600 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 H0YHG0 523 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 K7ENM7 598 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 TLR2O60603 784 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 KRT14P02533 472 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 ALAS1P13196 640 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 CCT5P48643 541 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 TRAF1Q13077 416 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 ZFYVE27Q5T4F4 411 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 GLYCTKQ8IVS8 523 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 SH2D3CQ8N5H7 860 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 CAPS2Q9BXY5 557 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 DDX47Q9H0S4 455 aaKnown RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 TYW1Q9NV66 732 aaKnown RBP8.39□□□□□ -1.07
HDAC9-201ENST00000401921 FBXO28Q9NVF7 368 aa8.39□□□□□ -1.07
HDAC9-201ENST00000401921 SMIM23A6NLE4 172 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 CCDC169A6NNP5 214 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 SORBS3O60504 671 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 SLC12A3P55017 1021 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 NAB2Q15742 525 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 CEP85LQ5SZL2 805 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 FAM43BQ6ZT52 329 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 MIER3Q7Z3K6 550 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 MMGT1Q8N4V1 131 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 KCNMB3Q9NPA1 279 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 DNAJC12Q9UKB3 198 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 MYH1P12882 1939 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 ABCB11O95342 1321 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 TLDC2A0PJX2 215 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 EBAG9O00559 213 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 PDXKO00764 312 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 KIF1CO43896 1103 aaKnown RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 NOL4O94818 638 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 GLI1P08151 1106 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 PON1P27169 355 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 HNRNPH3P31942 346 aaKnown RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 MAP2K2P36507 400 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 SF3A3Q12874 501 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 COG2Q14746 738 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 EDRF1Q3B7T1 1238 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 NSMFQ6X4W1 530 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 ZNF571Q7Z3V5 609 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 CCPG1Q9ULG6 757 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 MRPL11Q9Y3B7 192 aaKnown RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 BZW2Q9Y6E2 419 aaKnown RBP8.38□□□□□ -1.07
HDAC9-201ENST00000401921 PITPNM2Q9BZ72 1349 aa8.38□□□□□ -1.07
HDAC9-201ENST00000401921 A0A1W2PRG0 241 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 NDUFAB1O14561 156 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 ERLIN2O94905 339 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 EYA4O95677 639 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 SYF2O95926 243 aaKnown RBP8.37□□□□□ -1.07
HDAC9-201ENST00000401921 MCTP2Q6DN12 878 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 RINT1Q6NUQ1 792 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms