RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 BRPF3Q9ULD4 1205 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
LINC00544-201ENST00000400540 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 ZBTB42B2RXF5 422 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 PER2O15055 1255 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
LINC00544-201ENST00000400540 CLK2P49760 499 aaKnown RBP13.59□□□□□ -0.23
LINC00544-201ENST00000400540 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 VN1R2Q8NFZ6 395 aa13.59□□□□□ -0.23
LINC00544-201ENST00000400540 SMCO2A6NFE2 343 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 TBKBP1A7MCY6 615 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 FAM86B1E9PN63 330 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 MEIS1O00470 390 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 BACH1O14867 736 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 FAM86B2P0C5J1 330 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 ATP4AP20648 1035 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 SREBF1P36956 1147 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 COASYQ13057 564 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 RTN1Q16799 776 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
LINC00544-201ENST00000400540 SKAP1Q86WV1 359 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 KIAA0319LQ8IZA0 1049 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 NME8Q8N427 588 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 EDAQ92838 391 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
LINC00544-201ENST00000400540 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 PHOX2BQ99453 314 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 OSMRQ99650 979 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 ADAM2Q99965 735 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 RBM28Q9NW13 759 aaKnown RBP13.58□□□□□ -0.24
LINC00544-201ENST00000400540 USP15Q9Y4E8 981 aaPredicted RBP13.58□□□□□ -0.24
LINC00544-201ENST00000400540 PCDHB7Q9Y5E2 793 aa13.58□□□□□ -0.24
LINC00544-201ENST00000400540 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
LINC00544-201ENST00000400540 DENND3A2RUS2 1198 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 LOC730098B7Z3J9 87 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 DHX15O43143 795 aaKnown RBP13.57□□□□□ -0.24
LINC00544-201ENST00000400540 ZBTB43O43298 467 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 HBP1O60381 514 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 FOSP01100 380 aaPredicted RBP13.57□□□□□ -0.24
LINC00544-201ENST00000400540 FGFR1P11362 822 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 ERVFC1P60507 584 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 SYNE3Q6ZMZ3 975 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
LINC00544-201ENST00000400540 FAM228AQ86W67 206 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 PRSS33Q8NF86 280 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 TLE6Q9H808 572 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 ZNF302Q9NR11 478 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 TLR9Q9NR96 1032 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 RGS18Q9NS28 235 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
LINC00544-201ENST00000400540 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 ST3GAL5Q9UNP4 418 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 COL1A2P08123 1366 aa13.57□□□□□ -0.24
LINC00544-201ENST00000400540 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 TMEM221A6NGB7 291 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 GOLGA8AA7E2F4 631 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 GOLGA8BA8MQT2 603 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 C9IYK1 514 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 M0R296 226 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 FGF18O76093 207 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 C22orf31O95567 290 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 VTNP04004 478 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 CDC27P30260 824 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 ZNF76P36508 570 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 SLC26A2P50443 739 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
LINC00544-201ENST00000400540 APOBRQ0VD83 1088 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 IER5LQ5T953 404 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 FAM160B1Q5W0V3 765 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 PLA2G4DQ86XP0 818 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 NEK1Q96PY6 1258 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 KCNH6Q9H252 994 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 CWH43Q9H720 699 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 TYW1Q9NV66 732 aaKnown RBP13.56□□□□□ -0.24
LINC00544-201ENST00000400540 PCDHB12Q9Y5F1 795 aa13.56□□□□□ -0.24
LINC00544-201ENST00000400540 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 KLF18A0A0U1RQI7 1052 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 FSCN2O14926 492 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 PBX3P40426 434 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 ZXDAP98168 799 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 CBX2Q14781 532 aaPredicted RBP13.55□□□□□ -0.24
LINC00544-201ENST00000400540 DUSP6Q16828 381 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 ZNF484Q5JVG2 852 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms