RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 GSDMAQ96QA5 445 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 STK17AQ9UEE5 414 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 MYH9P35579 1960 aaKnown RBP12.97□□□□□ -0.33
SKA3-203ENST00000400018 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 HOXD13P35453 343 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 PSMC5P62195 406 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 KRT76Q01546 638 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 SP3Q02447 781 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
SKA3-203ENST00000400018 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
SKA3-203ENST00000400018 ELMO3Q96BJ8 720 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 TRIM5Q9C035 493 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 PNMA2Q9UL42 364 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 GCNT3O95395 438 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 STAT5BP51692 787 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 PEX3P56589 373 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
SKA3-203ENST00000400018 MAPK7Q13164 816 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 ZNF658Q5TYW1 1059 aaPredicted RBP12.97□□□□□ -0.33
SKA3-203ENST00000400018 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 MAP7D2Q96T17 732 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 MRPL44Q9H9J2 332 aaKnown RBP12.97□□□□□ -0.33
SKA3-203ENST00000400018 TUFT1Q9NNX1 390 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 IFNKQ9P0W0 207 aa12.97□□□□□ -0.33
SKA3-203ENST00000400018 SLC16A4O15374 487 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 PSAPP07602 524 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 INHBEP58166 350 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 TTLL4Q14679 1199 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 ZNF746Q6NUN9 644 aaPredicted RBP12.96□□□□□ -0.33
SKA3-203ENST00000400018 METTL7BQ6UX53 244 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 CCDC155Q8N6L0 562 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 XPNPEP1Q9NQW7 623 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.96□□□□□ -0.33
SKA3-203ENST00000400018 GINS2Q9Y248 185 aa12.96□□□□□ -0.33
SKA3-203ENST00000400018 SYNRGQ9UMZ2 1314 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 ASB14A6NK59 587 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 PES1O00541 588 aaKnown RBP12.96□□□□□ -0.34
SKA3-203ENST00000400018 RHOBTB3O94955 611 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 ZNF865P0CJ78 1059 aaPredicted RBP12.96□□□□□ -0.34
SKA3-203ENST00000400018 ICAM3P32942 547 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 TNFAIP2Q03169 654 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 FAM26FQ5R3K3 315 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 ODR4Q5SWX8 454 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 UNC13DQ70J99 1090 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.34
SKA3-203ENST00000400018 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 SCFD2Q8WU76 684 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 TRPC6Q9Y210 931 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 PCDHA2Q9Y5H9 948 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 CASP8AP2Q9UKL3 1982 aa12.96□□□□□ -0.34
SKA3-203ENST00000400018 EVPLQ92817 2033 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 ADGRA3Q8IWK6 1321 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 TTLL13PA6NNM8 815 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 HIC1Q14526 733 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 ADSSL1Q8N142 457 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 TMEM130Q8N3G9 435 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 USP6NLQ92738 828 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 SRRTQ9BXP5 876 aaKnown RBP12.95□□□□□ -0.34
SKA3-203ENST00000400018 CCDC169A6NNP5 214 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 VGLL3A8MV65 326 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 TEX33O43247 280 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 FAM13AO94988 1023 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 CLCN3P51790 818 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 MIS18BP1Q6P0N0 1132 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 METTL13Q8N6R0 699 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 DUSP9Q99956 384 aaKnown RBP12.95□□□□□ -0.34
SKA3-203ENST00000400018 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
SKA3-203ENST00000400018 VPS16Q9H269 839 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 PCIF1Q9H4Z3 704 aa12.95□□□□□ -0.34
SKA3-203ENST00000400018 R3HCC1Q9Y3T6 440 aaKnown RBP12.95□□□□□ -0.34
SKA3-203ENST00000400018 JAK3P52333 1124 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 AMPD3Q01432 767 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 APBA1Q02410 837 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 NEDD9Q14511 834 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 IPO4Q8TEX9 1081 aaKnown RBP12.94□□□□□ -0.34
SKA3-203ENST00000400018 TAB2Q9NYJ8 693 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 GPR25O00155 361 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 TBCAO75347 108 aaKnown RBP12.94□□□□□ -0.34
SKA3-203ENST00000400018 OFD1O75665 1012 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 CDK11BP21127 795 aaKnown RBP12.94□□□□□ -0.34
SKA3-203ENST00000400018 MYL5Q02045 173 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 CACNB2Q08289 660 aaPredicted RBP12.94□□□□□ -0.34
SKA3-203ENST00000400018 DMTNQ08495 405 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 TBC1D8BQ0IIM8 1120 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 PAK1Q13153 545 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 TPD52L1Q16890 204 aaPredicted RBP12.94□□□□□ -0.34
SKA3-203ENST00000400018 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 IRF2BP1Q8IU81 584 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 FIZ1Q96SL8 496 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms