RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 SLITRK6Q9H5Y7 841 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 FAM187AA6NFU0 413 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 TCP11X1B4DZS4 312 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 WDR46O15213 610 aaKnown RBP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 TOM1O60784 492 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 TJP3O95049 919 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 MCAMP43121 646 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 RFX8Q6ZV50 586 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 DYNLL2Q96FJ2 89 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 ZBBXA8MT70 800 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 DIAPH2O60879 1101 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 USP17L8P0C7I0 530 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 GPC5P78333 572 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 FAM83BQ5T0W9 1011 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 LRIG3Q6UXM1 1119 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 PCGF5Q86SE9 256 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 PDIK1LQ8N165 341 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 RAD54LQ92698 747 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 HEMGNQ9BXL5 484 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 ZWILCHQ9H900 591 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 ZNF277Q9NRM2 450 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-205ENST00000399050 TLK1Q9UKI8 766 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 ZNF804BA4D1E1 1349 aa9.27□□□□□ -0.93
CTNND1-205ENST00000399050 CCDC195A0A1B0GUA6 201 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 GSTA4O15217 222 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CHN1P15882 459 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 TRMT10CQ7L0Y3 403 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 STRBPQ96SI9 672 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 NDE1Q9NXR1 346 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 APOBEC2Q9Y235 224 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 GOLGA8MH3BSY2 632 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 FGFR4P22455 802 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CHRNA3P32297 505 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 KCNH2Q12809 1159 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 FAF2Q96CS3 445 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 TTC25Q96NG3 672 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 SEC31BQ9NQW1 1179 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ANAPC7Q9UJX3 599 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ENO4A6NNW6 628 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 LSP1P33241 339 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ARL4CP56559 192 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 NR1I3Q14994 352 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 PFKFB3Q16875 520 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 SPATA21Q7Z572 469 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 RSPH3Q86UC2 560 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 HSPH1Q92598 858 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 BATF3Q9NR55 127 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 LIMA1Q9UHB6 759 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 RFX7Q2KHR2 1363 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 PHF20L1A8MW92 1017 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 COASYQ13057 564 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CDC37Q16543 378 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 SPOPLQ6IQ16 392 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 WDR75Q8IWA0 830 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 GRAMD1AQ96CP6 724 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 HOOK2Q96ED9 719 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ANKRD36BP1Q96IX9 119 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ZMAT2Q96NC0 199 aaKnown RBP9.26□□□□□ -0.93
CTNND1-205ENST00000399050 TTC1Q99614 292 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 TRIM15Q9C019 465 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CCDC68Q9H2F9 335 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 SLC40A1Q9NP59 571 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 AMACRQ9UHK6 382 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 GOLGA8IPA6NC78 632 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 GOLGA8JA6NMD2 632 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 HSPA4LO95757 839 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ARFIP2P53365 341 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 PDXDC1Q6P996 788 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 LRRC31Q6UY01 552 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 STAG2Q8N3U4 1231 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 TEX9Q8N6V9 391 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 TC2NQ8N9U0 490 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 DNAAF3Q8N9W5 541 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CCNYQ8ND76 341 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ICA1LQ8NDH6 482 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 IRAK4Q9NWZ3 460 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 ITIH6Q6UXX5 1313 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 CDC42BPBQ9Y5S2 1711 aa9.26□□□□□ -0.93
CTNND1-205ENST00000399050 IRAK1P51617 712 aa9.25□□□□□ -0.93
CTNND1-205ENST00000399050 FBXO2Q9UK22 296 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-205ENST00000399050 CCPG1Q9ULG6 757 aa9.25□□□□□ -0.93
CTNND1-205ENST00000399050 FHOD1Q9Y613 1164 aa9.25□□□□□ -0.93
CTNND1-205ENST00000399050 SRGAP2BP0DMP2 458 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms