RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ANAPC4Q9UJX5 808 aa10.77□□□□□ -0.68
PTCHD4-202ENST00000398738 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.68
PTCHD4-202ENST00000398738 TDP2O95551 362 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 MMEP08473 750 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 PLTPP55058 493 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 PTK2Q05397 1052 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC18A3Q16572 532 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 DCAF17Q5H9S7 520 aaPredicted RBP10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 TEX11Q8IYF3 940 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 FAM174AQ8TBP5 190 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 PRCCQ92733 491 aaPredicted RBP10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 GLG1Q92896 1179 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 MTFR1LQ9H019 292 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 IL17RBQ9NRM6 502 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 ABCA3Q99758 1704 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 AKAP11Q9UKA4 1901 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 PJA2O43164 708 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 NOL4O94818 638 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 TRIM37O94972 964 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 KIF4AO95239 1232 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 FGFR1OPO95684 399 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 KRT18P05783 430 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 CHN1P15882 459 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC9A1P19634 815 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 TNNI2P48788 182 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 BYSLQ13895 437 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 OTUD6AQ7L8S5 288 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 CCDC25Q86WR0 208 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 CCDC197Q8NCU1 140 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 FAM167BQ9BTA0 163 aa10.77□□□□□ -0.69
PTCHD4-202ENST00000398738 MYH2Q9UKX2 1941 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 SPDYE3A6NKU9 549 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 ENO4A6NNW6 628 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 TNFRSF8P28908 595 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 ECHS1P30084 290 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 EIF6P56537 245 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 ELF3P78545 371 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 GRB10Q13322 594 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 CALCRLQ16602 461 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 CD302Q8IX05 232 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 MYOCDQ8IZQ8 938 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 DYDC1Q8WWB3 177 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 COA7Q96BR5 231 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 SPDL1Q96EA4 605 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 PSMD1Q99460 953 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 BLOC1S4Q9NUP1 217 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 RNF14Q9UBS8 474 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 SNX24Q9Y343 169 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 COL4A3BPQ9Y5P4 624 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 ECM29Q5VYK3 1845 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 SPEF2Q9C093 1822 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 H0YGN5 161 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 STXBP3O00186 592 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 PGRMC1O00264 195 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 ATP6V1G2O95670 118 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 FGGP02679 453 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 KRT13P13646 458 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 IFI35P80217 286 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 HERC4Q5GLZ8 1057 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 GJB7Q6PEY0 223 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 NEK8Q86SG6 692 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 LRRC34Q8IZ02 419 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 CHMP6Q96FZ7 201 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 RSRC1Q96IZ7 334 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 NFS1Q9Y697 457 aa10.76□□□□□ -0.69
PTCHD4-202ENST00000398738 SSU72P8A0A1W2PR75 194 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 UBAP1LF5GYI3 381 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 F8W031 263 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CYP19A1P11511 503 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 UBAP2Q5T6F2 1119 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ALKBH5Q6P6C2 394 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 LRRC55Q6ZSA7 311 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 MREGQ8N565 214 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 U2AF1L4Q8WU68 220 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 RUBCNQ92622 972 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 XPO6Q96QU8 1125 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 PRMT1Q99873 361 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 BRIP1Q9BX63 1249 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CHORDC1Q9UHD1 332 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 FOXO6A8MYZ6 492 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC37A4O43826 429 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 DIAPH2O60879 1101 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 LCA5LO95447 670 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ANP32DO95626 131 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 MYL1P05976 194 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 DRD4P21917 467 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 FKBP3Q00688 224 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 UNC13DQ70J99 1090 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ZNF571Q7Z3V5 609 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ANKS4BQ8N8V4 417 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 PBXIP1Q96AQ6 731 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms