RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DHX15O43143 795 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 KRT18P05783 430 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 PTPRAP18433 802 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 VCAM1P19320 739 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NR2F2P24468 414 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 PPIL2Q13356 520 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 SRGAP1Q7Z6B7 1085 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 AFAP1L1Q8TED9 768 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 CTDP1Q9Y5B0 961 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 CSADQ9Y600 493 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 MPHOSPH10O00566 681 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NKRFO15226 690 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NR3C2P08235 984 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 TNFRSF8P28908 595 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 DRG2P55039 364 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 UBXN1Q04323 297 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 IKQ13123 557 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 FAM83BQ5T0W9 1011 aa6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 NIFKQ9BYG3 293 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 CNOT7Q9UIV1 285 aaKnown RBP6.43□□□□□ -1.38
PTPRD-206ENST00000397617 ATG7O95352 703 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 ITGB5P18084 799 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 TECP42680 631 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CATSPER3Q86XQ3 398 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 MAP4K3Q8IVH8 894 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 PRDM16Q9HAZ2 1276 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 PYCARDQ9ULZ3 195 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 COL1A2P08123 1366 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 PHIPQ8WWQ0 1821 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 IGKV6D-21A0A0A0MT36 114 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 INHBEP58166 350 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 NNTQ13423 1086 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CCDC43Q96MW1 224 aaKnown RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 C2orf40Q9H1Z8 148 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 ARFGAP3Q9NP61 516 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 SLC37A4O43826 429 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 KRT13P13646 458 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 MAPK6Q16659 721 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CCDC40Q4G0X9 1142 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CD302Q8IX05 232 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 REM2Q8IYK8 340 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 GOLGA1Q92805 767 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 HOMER3Q9NSC5 361 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 PANK4Q9NVE7 773 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 SLC5A4Q9NY91 659 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 ARHGAP28Q9P2N2 729 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 MORF4L1Q9UBU8 362 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 GDAQ9Y2T3 454 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 GNG11P61952 73 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 EN1Q05925 392 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 RSRC2Q7L4I2 434 aaKnown RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 AFG1LQ8WV93 481 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 BHMT2Q9H2M3 363 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 TMEM134Q9H6X4 195 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 AFPP02771 609 aaKnown RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CAPN2P17655 700 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CHRNA5P30532 468 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 STAT3P40763 770 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 PAFAH1B1P43034 410 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 AMPD2Q01433 879 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 LDLRAD1Q5T700 205 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 SULF1Q8IWU6 871 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 FAM133AQ8N9E0 248 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 NAP1L5Q96NT1 182 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 EIF2AK1Q9BQI3 630 aaKnown RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 FAM13AO94988 1023 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 NR3C1P04150 777 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 VEGFAP15692 232 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 ADAM9Q13443 819 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 CDAN1Q8IWY9 1227 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 BAP1Q92560 729 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 BIN2Q9UBW5 565 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-206ENST00000397617 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
PTPRD-206ENST00000397617 PAPPA2Q9BXP8 1791 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 SPATA31C2B4DYI2 1134 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 FAM86B1E9PN63 330 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 GGPS1O95749 300 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 FAM86B2P0C5J1 330 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 STAT1P42224 750 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PRR16Q569H4 304 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ARMC3Q5W041 872 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 USP17L6PQ6QN14 398 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CATSPERGQ6ZRH7 1159 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 RAB11FIP4Q86YS3 637 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 COA7Q96BR5 231 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ACCSQ96QU6 501 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 RPS6KC1Q96S38 1066 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 RMDN3Q96TC7 470 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 KCNH7Q9NS40 1196 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ASB14A6NK59 587 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 SMAPO00193 183 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 SLITRK3O94933 977 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 STAU1O95793 577 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PLPPR4Q7Z2D5 763 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 SCFD2Q8WU76 684 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 C16orf45Q96MC5 204 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 NOX5Q96PH1 765 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 RNF146Q9NTX7 359 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 EFR3BQ9Y2G0 817 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms