RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GJC1P36383 396 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 SLC12A3P55017 1021 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 CEP55Q53EZ4 464 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 KIAA1755Q5JYT7 1200 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 TRIM59Q8IWR1 403 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 SYT2Q8N9I0 419 aaPredicted RBP11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 UHMK1Q8TAS1 419 aaKnown RBP11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 KCNMB3Q9NPA1 279 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA6L10A6NI86 522 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 BACH1O14867 736 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 PSMC2P35998 433 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 ZNF211Q13398 564 aaPredicted RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 XKR9Q5GH70 373 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 PPM1KQ8N3J5 372 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 RPGRIP1Q96KN7 1286 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CTTNBP2NLQ9P2B4 639 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DNAJC12Q9UKB3 198 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 ANO9A1A5B4 782 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 YDJCA8MPS7 323 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 KRIT1O00522 736 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 ZBTB7AO95365 584 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DLATP10515 647 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 COPB2P35606 906 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CLK2P49760 499 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CETN1Q12798 172 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 WDR78Q5VTH9 848 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DDX42Q86XP3 938 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 UBLCP1Q8WVY7 318 aaPredicted RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 WDR18Q9BV38 432 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DDX47Q9H0S4 455 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 NFIBO00712 420 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 TUBBP07437 444 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 RXRBP28702 533 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CARSP49589 748 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 PEX3P56589 373 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 SLC18A3Q16572 532 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CCNI2Q6ZMN8 369 aaPredicted RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 ZNF571Q7Z3V5 609 aaPredicted RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 CREG2Q8IUH2 290 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 IFT20Q8IY31 132 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DHX37Q8IY37 1157 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 KIFC3Q9BVG8 833 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 EHD4Q9H223 541 aa11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 UBE2TQ9NPD8 197 aaPredicted RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
CPSF1P1-201ENST00000397477 DOCK2Q92608 1830 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 TLDC2A0PJX2 215 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 HIP1RO75146 1068 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 EYA4O95677 639 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 SREBF1P36956 1147 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 PRELPP51888 382 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 DRAP1Q14919 205 aaPredicted RBP11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 PADI6Q6TGC4 694 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 IQCDQ96DY2 449 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 NACC1Q96RE7 527 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 TLR10Q9BXR5 811 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 CCDC113Q9H0I3 377 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 STIM2Q9P246 746 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 BCORQ6W2J9 1755 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 SLC16A4O15374 487 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 PON1P27169 355 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 TNNC1P63316 161 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 ETNPPLQ8TBG4 499 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 SAAL1Q96ER3 474 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM84AQ96KN4 292 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 IDI2Q9BXS1 227 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 UNC45AQ9H3U1 944 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 METTL14Q9HCE5 456 aaKnown RBP11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 NOL4O94818 638 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 KRT5P13647 590 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 POLD1P28340 1107 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 NPEPPSP55786 919 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 MYL7Q01449 175 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 RASA3Q14644 834 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 TRADDQ15628 312 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 KLHDC7AQ5VTJ3 777 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 PLA2G4FQ68DD2 849 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 RAB21Q9UL25 225 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
CPSF1P1-201ENST00000397477 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 SLITRK3O94933 977 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 SOX10P56693 466 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 IFI16Q16666 785 aaKnown RBP11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 FIGNQ5HY92 759 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 TNRC6CQ9HCJ0 1690 aaKnown RBP11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 DPEP1P16444 411 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms