RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SLITRK3O94933 977 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 PARNO95453 639 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 PFKMP08237 780 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 MBTPS1Q14703 1052 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 TARBP2Q15633 366 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 TMEM240Q5SV17 173 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 FOXD4L5Q5VV16 416 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 DTHD1Q6ZMT9 781 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 ERMNQ8TAM6 284 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 FOXD4L4Q8WXT5 416 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 RAB34Q9BZG1 259 aa23.73■■□□□ 1.39
TSPAN4-206ENST00000397408 TET1Q8NFU7 2136 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 EVPLQ92817 2033 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 MAGEB2O15479 319 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 NBNO60934 754 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 RPLP2P05387 115 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 PDIA4P13667 645 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 YWHABP31946 246 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 TBC1D8BQ0IIM8 1120 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 GPNMBQ14956 572 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 SF3A1Q15459 793 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 IL17AQ16552 155 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 ZNF365Q70YC5 407 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 METTL13Q8N6R0 699 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 FTOQ9C0B1 505 aaKnown RBP eCLIP23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 LRWD1Q9UFC0 647 aa23.72■■□□□ 1.39
TSPAN4-206ENST00000397408 RBAK-RBAKDNI3L0D1 243 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 BMP15O95972 392 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 MRPS6P82932 125 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 TMEM62Q0P6H9 643 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 PKP1Q13835 747 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 HAUS3Q68CZ6 603 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 IGSF22Q8N9C0 903 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 RNPC3Q96LT9 517 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 TUFT1Q9NNX1 390 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 CDY2AQ9Y6F7 541 aa23.71■■□□□ 1.39
TSPAN4-206ENST00000397408 MED24O75448 989 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 LYPLA2O95372 231 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CHRNA1P02708 482 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 SPATA31C1P0DKV0 1188 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 ZSCAN22P10073 491 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CLCN3P51790 818 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 NPEPPSP55786 919 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 MGAT3Q09327 533 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 PDIA5Q14554 519 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 FAM26DQ5JW98 314 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 ARL6IP4Q66PJ3 421 aaKnown RBP23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CATSPER3Q86XQ3 398 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 KIAA0319LQ8IZA0 1049 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 LRRC71Q8N4P6 559 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CEP170P1Q96L14 293 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CEP89Q96ST8 783 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 POLR3CQ9BUI4 534 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CYP26B1Q9NR63 512 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 CLIC4Q9Y696 253 aa23.7■■□□□ 1.38
TSPAN4-206ENST00000397408 VWA3AA6NCI4 1184 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 M0QZ92 97 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 ZBTB39O15060 712 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 FGBP02675 491 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 CXCL10P02778 98 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 HABP4Q5JVS0 413 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 IER5Q5VY09 327 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 EFCAB12Q6NXP0 572 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 OTUD6AQ7L8S5 288 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 OTOP2Q7RTS6 562 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 SUGCTQ9HAC7 445 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 SIP14410 1827 aa23.69■■□□□ 1.38
TSPAN4-206ENST00000397408 LAMA3Q16787 3333 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 PP2D1A8MPX8 630 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 RPA1P27694 616 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 TMOD1P28289 359 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 XKR9Q5GH70 373 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 POTEGQ6S5H5 508 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 NME8Q8N427 588 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 LINC01465Q8N7H1 131 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 ZNF579Q8NAF0 562 aaKnown RBP23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 SNX29Q8TEQ0 813 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 TRPV2Q9Y5S1 764 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 MYH15Q9Y2K3 1946 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 ARID2Q68CP9 1835 aa23.68■■□□□ 1.38
TSPAN4-206ENST00000397408 F13A1P00488 732 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 CCT6AP40227 531 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 CEBPZQ03701 1054 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 HERVK_113Q902F9 699 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 CCDC43Q96MW1 224 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 USP28Q96RU2 1077 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 MAP7D2Q96T17 732 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 PPP1R16BQ96T49 567 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 OSBPL7Q9BZF2 842 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 AKT3Q9Y243 479 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 PPME1Q9Y570 386 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 A0A087WWV3 80 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 VTNP04004 478 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 GHRP10912 638 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 ACTN1P12814 892 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 PIGOQ8TEQ8 1089 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 MTIF3Q9H2K0 278 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 BMP2KQ9NSY1 1161 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 ANKEF1Q9NU02 776 aa23.67■■□□□ 1.38
TSPAN4-206ENST00000397408 GINS2Q9Y248 185 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms