RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MOCS2O96007 188 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 PFKFB1P16118 471 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 NEK8Q86SG6 692 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 C5orf58C9J3I9 102 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 COPEO14579 308 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 MEFVO15553 781 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 NR2F2P24468 414 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 TRIM71Q2Q1W2 868 aaKnown RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 KLHL24Q6TFL4 600 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 ARMCX2Q7L311 632 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 SLC35F6Q8N357 371 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 DCTN4Q9UJW0 460 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 PSMA2P25787 234 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 COPS2P61201 443 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 FAM26FQ5R3K3 315 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 SMARCAD1Q9H4L7 1026 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 EPN1Q9Y6I3 576 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 NR5A1Q13285 461 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 SOX13Q9UN79 622 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 H0Y626 953 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 TRIM16O95361 564 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 DEUP1Q05D60 604 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
SMU1-201ENST00000397149 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 PARVGQ9HBI0 331 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
SMU1-201ENST00000397149 A0A1B0GW55 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 MID2Q9UJV3 735 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 PAIP2BQ9ULR5 123 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 PASD1Q8IV76 773 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 SNX21Q969T3 373 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 SMYD4Q8IYR2 804 aaPredicted RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 PLEKHA8Q96JA3 519 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 TUBB6Q9BUF5 446 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 BCL2L14Q9BZR8 327 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 C6orf118Q5T5N4 469 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 ARL8AQ96BM9 186 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 MAP3K15Q6ZN16 1313 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 ASAP2O43150 1006 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 CCNA1P78396 465 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 DEPDC7Q96QD5 511 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 ACTR5Q9H9F9 607 aaPredicted RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 CSE1LP55060 971 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 MAPRE1Q15691 268 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 WDR75Q8IWA0 830 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 UNC45BQ8IWX7 931 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
SMU1-201ENST00000397149 LLPHQ9BRT6 129 aaKnown RBP13.18□□□□□ -0.3
SMU1-201ENST00000397149 KRT75O95678 551 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 A1BGP04217 495 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 NME3Q13232 169 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 BCAMP50895 628 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
SMU1-201ENST00000397149 RASSF3Q86WH2 238 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
SMU1-201ENST00000397149 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 NNTQ13423 1086 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 CENPUQ71F23 418 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 MFN1Q8IWA4 741 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
SMU1-201ENST00000397149 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms