RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ETNPPLQ8TBG4 499 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 GABBR1Q9UBS5 961 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 CDY2AQ9Y6F7 541 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 VCANP13611 3396 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 EVPLQ92817 2033 aa15.72■□□□□ 0.11
SEC13-204ENST00000397099 SIP14410 1827 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 COL4A6Q14031 1691 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 LCHNA4D1U4 455 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 EPOPA6NHQ4 379 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 TDP2O95551 362 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 MMP1P03956 469 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 GHRP10912 638 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 FDPSP14324 419 aaKnown RBP15.71■□□□□ 0.11
SEC13-204ENST00000397099 POU3F3P20264 500 aaPredicted RBP15.71■□□□□ 0.11
SEC13-204ENST00000397099 RABEP1Q15276 862 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 MIER3Q7Z3K6 550 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 EXOC8Q8IYI6 725 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 SLFN12Q8IYM2 578 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 MYOCDQ8IZQ8 938 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 ATXN2LQ8WWM7 1075 aaKnown RBP15.71■□□□□ 0.11
SEC13-204ENST00000397099 TOP1MTQ969P6 601 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 SAMD11Q96NU1 681 aa15.71■□□□□ 0.11
SEC13-204ENST00000397099 CELF4Q9BZC1 486 aaKnown RBP15.71■□□□□ 0.11
SEC13-204ENST00000397099 FAM49AQ9H0Q0 323 aaPredicted RBP15.71■□□□□ 0.11
SEC13-204ENST00000397099 ST18O60284 1047 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 MARCH6O60337 910 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 CCNT1O60563 726 aaKnown RBP15.7■□□□□ 0.1
SEC13-204ENST00000397099 OATP04181 439 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 MRPS5P82675 430 aaKnown RBP15.7■□□□□ 0.1
SEC13-204ENST00000397099 HTRA4P83105 476 aaPredicted RBP15.7■□□□□ 0.1
SEC13-204ENST00000397099 PPP2R5CQ13362 524 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 LPIN1Q14693 890 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 B3GNT9Q6UX72 402 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 PIK3AP1Q6ZUJ8 805 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 JPH2Q9BR39 696 aaPredicted RBP15.7■□□□□ 0.1
SEC13-204ENST00000397099 UNC45AQ9H3U1 944 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 MTUS1Q9ULD2 1270 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 KIF3AQ9Y496 699 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 PPME1Q9Y570 386 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 MTCH2Q9Y6C9 303 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 CUL9Q8IWT3 2517 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 LOXHD1Q8IVV2 1947 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 REV3LO60673 3130 aa15.7■□□□□ 0.1
SEC13-204ENST00000397099 ZBTB42B2RXF5 422 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 LARGE1O95461 756 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 ATP4AP20648 1035 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 XKR3Q5GH77 459 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
SEC13-204ENST00000397099 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 ASB2Q96Q27 587 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 TGS1Q96RS0 853 aaKnown RBP15.69■□□□□ 0.1
SEC13-204ENST00000397099 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 LMCD1Q9NZU5 365 aa15.69■□□□□ 0.1
SEC13-204ENST00000397099 GPR182O15218 404 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 CHMP2AO43633 222 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 C22orf31O95567 290 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 MCM2P49736 904 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 CRYBB1P53674 252 aaPredicted RBP15.68■□□□□ 0.1
SEC13-204ENST00000397099 PSMC5P62195 406 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 PRKCEQ02156 737 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 PAK2Q13177 524 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 GRB10Q13322 594 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
SEC13-204ENST00000397099 KRT40Q6A162 431 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 SPRED2Q7Z698 418 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 METTL13Q8N6R0 699 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
SEC13-204ENST00000397099 YME1L1Q96TA2 773 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 NIFKQ9BYG3 293 aaKnown RBP15.68■□□□□ 0.1
SEC13-204ENST00000397099 RWDD3Q9Y3V2 267 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 TTC3P53804 2025 aa15.68■□□□□ 0.1
SEC13-204ENST00000397099 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.67■□□□□ 0.1
SEC13-204ENST00000397099 SLC37A4O43826 429 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 P4HBP07237 508 aaKnown RBP15.67■□□□□ 0.1
SEC13-204ENST00000397099 STAG3L1P0CL83 205 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 DNM2P50570 870 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 ERVK-21P61565 698 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 DIS3L2Q8IYB7 885 aaKnown RBP15.67■□□□□ 0.1
SEC13-204ENST00000397099 FAM184AQ8NB25 1140 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 OXER1Q8TDS5 423 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 GDPD5Q8WTR4 605 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 TNFRSF25Q93038 417 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 C8orf76Q96K31 380 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 UIMC1Q96RL1 719 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 KIF2CQ99661 725 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 RALGAPA2Q2PPJ7 1873 aa15.67■□□□□ 0.1
SEC13-204ENST00000397099 LINC01553A4QN01 128 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 ENPP3O14638 875 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 ZNF862O60290 1169 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 JAK2O60674 1132 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 UPP2O95045 317 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 CD52P31358 61 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 QARSP47897 775 aaKnown RBP15.66■□□□□ 0.1
SEC13-204ENST00000397099 NR5A1Q13285 461 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms