RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
CBX3-202ENST00000396386 HIP1RO75146 1068 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 LYPLA2O95372 231 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 AFPP02771 609 aaKnown RBP16.44■□□□□ 0.22
CBX3-202ENST00000396386 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
CBX3-202ENST00000396386 QARSP47897 775 aaKnown RBP16.44■□□□□ 0.22
CBX3-202ENST00000396386 JAK3P52333 1124 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 KIF11P52732 1056 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 ODR4Q5SWX8 454 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 SYN2Q92777 582 aaPredicted RBP16.44■□□□□ 0.22
CBX3-202ENST00000396386 CDC23Q9UJX2 597 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 AKAP3O75969 853 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 NOL4O94818 638 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 PLEKP08567 350 aaPredicted RBP16.43■□□□□ 0.22
CBX3-202ENST00000396386 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
CBX3-202ENST00000396386 MAPK7Q13164 816 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 BAATQ14032 418 aaPredicted RBP16.43■□□□□ 0.22
CBX3-202ENST00000396386 COG2Q14746 738 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 PADI6Q6TGC4 694 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 CCDC43Q96MW1 224 aaKnown RBP16.43■□□□□ 0.22
CBX3-202ENST00000396386 FIZ1Q96SL8 496 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 NLRC4Q9NPP4 1024 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 ZNF214Q9UL59 606 aaPredicted RBP16.43■□□□□ 0.22
CBX3-202ENST00000396386 RIPK3Q9Y572 518 aa16.43■□□□□ 0.22
CBX3-202ENST00000396386 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 ATP2A1O14983 1001 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 LCA5LO95447 670 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 SFNP31947 248 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 HIRAP54198 1017 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 POLR2FP61218 127 aaKnown RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 KRT76Q01546 638 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 KCNA1Q09470 495 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 ZC2HC1CQ53FD0 456 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 DCAF17Q5H9S7 520 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 FBXO38Q6PIJ6 1188 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 CATSPERGQ6ZRH7 1159 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 HS2ST1Q7LGA3 356 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 ZNF720Q7Z2F6 126 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 CEP112Q8N8E3 955 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
CBX3-202ENST00000396386 GOLGA1Q92805 767 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 CRACR2AQ9BSW2 395 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 GANQ9H2C0 597 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 PCDHB13Q9Y5F0 798 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 SSU72P8A0A1W2PR75 194 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 CLIC2O15247 247 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 AKR1B10O60218 316 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 PPP1R12BO60237 982 aaPredicted RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 CYP27A1Q02318 531 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 GOLGA5Q8TBA6 731 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 MKNK1Q9BUB5 465 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 TEX13BQ9BXU2 312 aa16.42■□□□□ 0.22
CBX3-202ENST00000396386 IFIH1Q9BYX4 1025 aaKnown RBP16.42■□□□□ 0.22
CBX3-202ENST00000396386 K7ENM7 598 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 ZNF263O14978 683 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 USO1O60763 962 aaKnown RBP16.41■□□□□ 0.22
CBX3-202ENST00000396386 CASP4P49662 377 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 RARRES1P49788 294 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 KIF5AQ12840 1032 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 ALCAMQ13740 583 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 WHAMMP3Q1A5X7 153 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 TDRD12Q587J7 1177 aaKnown RBP16.41■□□□□ 0.22
CBX3-202ENST00000396386 TCERG1LQ5VWI1 586 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 SRGAP1Q7Z6B7 1085 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 NLRX1Q86UT6 975 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 FAM186BQ8IYM0 893 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 DAW1Q8N136 415 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 TXLNBQ8N3L3 684 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 RDM1Q8NG50 284 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 PURBQ96QR8 312 aaKnown RBP16.41■□□□□ 0.22
CBX3-202ENST00000396386 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 ACAD9Q9H845 621 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 TFR2Q9UP52 801 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
CBX3-202ENST00000396386 RCCD1A6NED2 376 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 SERPING1P05155 500 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 MAPTP10636 758 aaKnown RBP16.4■□□□□ 0.22
CBX3-202ENST00000396386 H2AFXP16104 143 aaPredicted RBP16.4■□□□□ 0.22
CBX3-202ENST00000396386 PSMC2P35998 433 aaKnown RBP16.4■□□□□ 0.22
CBX3-202ENST00000396386 TEX35Q5T0J7 233 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 HGSNATQ68CP4 663 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 RSRC2Q7L4I2 434 aaKnown RBP16.4■□□□□ 0.22
CBX3-202ENST00000396386 C4orf19Q8IY42 314 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
CBX3-202ENST00000396386 LACRTQ9GZZ8 138 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 MAF1Q9H063 256 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
CBX3-202ENST00000396386 LARSQ9P2J5 1176 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms