RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 CRACR2AQ9BSW2 395 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 PLAGL2Q9UPG8 496 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 ZMYM2Q9UBW7 1377 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 WDR90Q96KV7 1748 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 ABL1P00519 1130 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 EPB41P11171 864 aaKnown RBP13.35□□□□□ -0.27
ITGB1-202ENST00000396033 HERVK_113P62684 666 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 MNS1Q8NEH6 495 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 RBM46Q8TBY0 533 aaKnown RBP13.35□□□□□ -0.27
ITGB1-202ENST00000396033 UBE4BO95155 1302 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 JAK3P52333 1124 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 MAEAQ7L5Y9 396 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 NSUN6Q8TEA1 469 aaKnown RBP13.35□□□□□ -0.27
ITGB1-202ENST00000396033 CCDC42Q96M95 316 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 ZNF446Q9NWS9 450 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 CSADQ9Y600 493 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 SLC16A3O15427 465 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 AKAP3O75969 853 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 KRT76Q01546 638 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 PDXDC1Q6P996 788 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 ZNF720Q7Z2F6 126 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 VSIG10LQ86VR7 867 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 BAP1Q92560 729 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 FIZ1Q96SL8 496 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 DBR1Q9UK59 544 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 EIF3CLB5ME19 914 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 ELF2Q15723 593 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 UGCGQ16739 394 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 DCAF17Q5H9S7 520 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 KSR1Q8IVT5 923 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 SLC35F6Q8N357 371 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 EIF3CQ99613 913 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 EDEM3Q9BZQ6 932 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 A1CFQ9NQ94 594 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 CYP39A1Q9NYL5 469 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 CEP72Q9P209 647 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 MRFAP1Q9Y605 127 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 USO1O60763 962 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
ITGB1-202ENST00000396033 SFNP31947 248 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 RARRES1P49788 294 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 MAPK7Q13164 816 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 CARD6Q9BX69 1037 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 IKZF4Q9H2S9 585 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 HAUS4Q9H6D7 363 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 TRIM10Q9UDY6 481 aa13.34□□□□□ -0.27
ITGB1-202ENST00000396033 LYPLA2O95372 231 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 CCNE2O96020 404 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.27
ITGB1-202ENST00000396033 CASP4P49662 377 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 PPP2R3AQ06190 1150 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 TCERG1LQ5VWI1 586 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.27
ITGB1-202ENST00000396033 DAW1Q8N136 415 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 DEF6Q9H4E7 631 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 METTL14Q9HCE5 456 aaKnown RBP13.33□□□□□ -0.27
ITGB1-202ENST00000396033 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.27
ITGB1-202ENST00000396033 MYH11P35749 1972 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 K7ENM7 598 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
ITGB1-202ENST00000396033 TREML2Q5T2D2 321 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 HS2ST1Q7LGA3 356 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 JAKMIP2Q96AA8 810 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 ARHGAP20Q9P2F6 1191 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 CTAGE9A4FU28 777 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 POLR2FP61218 127 aaKnown RBP13.33□□□□□ -0.28
ITGB1-202ENST00000396033 PSMC5P62195 406 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 INPP4AQ96PE3 977 aaPredicted RBP13.33□□□□□ -0.28
ITGB1-202ENST00000396033 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
ITGB1-202ENST00000396033 NOL4O94818 638 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 SPA17Q15506 151 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 TERF2Q15554 542 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 SH2D3AQ9BRG2 576 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 TMEM150BA6NC51 233 aa13.32□□□□□ -0.28
ITGB1-202ENST00000396033 EIF4A3P38919 411 aaKnown RBP13.32□□□□□ -0.28
ITGB1-202ENST00000396033 CYP27A1Q02318 531 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms