RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 HNRNPCL3B7ZW38 293 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 VWA5AO00534 786 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 FYB1O15117 783 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 NCK2O43639 380 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 SLFN14P0C7P3 912 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 HNRNPCL4P0DMR1 293 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 PECAM1P16284 738 aaPredicted RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 PLCG2P16885 1265 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 TKTL1P51854 596 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ARHGDIBP52566 201 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ATXN1P54253 815 aaKnown RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 CENPCQ03188 943 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 FAM178BQ8IXR5 827 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 RUFY2Q8WXA3 655 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 KIAA1191Q96A73 305 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 SAMD11Q96NU1 681 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 NAP1L3Q99457 506 aaPredicted RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 GBP3Q9H0R5 595 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 LUC7LQ9NQ29 371 aaKnown RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 TMED5Q9Y3A6 229 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 SESN1Q9Y6P5 492 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 CGNL1Q0VF96 1302 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 TPP1O14773 563 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ERLIN1O75477 346 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 S100A6P06703 90 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 RHCEP18577 417 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ANXA13P27216 316 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 TUBA1BP68363 451 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 RHDQ02161 417 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 PTPN21Q16825 1174 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 SLC10A6Q3KNW5 377 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ARHGAP29Q52LW3 1261 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 PM20D1Q6GTS8 502 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ANGPTL8Q6UXH0 198 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 TUBA1AQ71U36 451 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 MICALL2Q8IY33 904 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 SIMC1Q8NDZ2 872 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 ST13P5Q8NFI4 369 aaPredicted RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 SLC30A5Q8TAD4 765 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 TRIM56Q9BRZ2 755 aaKnown RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 SPON2Q9BUD6 331 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 LSM14BQ9BX40 385 aaKnown RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 NSRP1Q9H0G5 558 aaKnown RBP4.66□□□□□ -1.66
HERC4-204ENST00000395198 UBN1Q9NPG3 1134 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 MOCS1Q9NZB8 636 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 AXIN2Q9Y2T1 843 aa4.66□□□□□ -1.66
HERC4-204ENST00000395198 CAPN14A8MX76 684 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ERC2O15083 957 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ACSL4O60488 711 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 PIAS2O75928 621 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 FAM153BP0C7A2 387 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 COL6A2P12110 1019 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 VAV1P15498 845 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 MAPK4P31152 587 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 GNL1P36915 607 aaPredicted RBP4.65□□□□□ -1.66
HERC4-204ENST00000395198 HNMTP50135 292 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 EIF4G2P78344 907 aaKnown RBP eCLIP4.65□□□□□ -1.66
HERC4-204ENST00000395198 IKBKEQ14164 716 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 HS1BP3Q53T59 392 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 CEP135Q66GS9 1140 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 FCRLBQ6BAA4 426 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 SLC30A6Q6NXT4 461 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 SUPT20HQ8NEM7 779 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 AGR3Q8TD06 166 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 PPP1R16BQ96T49 567 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 FSD1Q9BTV5 496 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 DHRS4Q9BTZ2 278 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 APOL5Q9BWW9 433 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ZMYM5Q9UJ78 669 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 PCOLCE2Q9UKZ9 415 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ATP11BQ9Y2G3 1177 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 WDR19Q8NEZ3 1342 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 RGSL1A5PLK6 1076 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 B2RBV5 119 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 STMND1H3BQB6 276 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 USO1O60763 962 aaKnown RBP4.65□□□□□ -1.66
HERC4-204ENST00000395198 ALDH1A2O94788 518 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 POTEIP0CG38 1075 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 GAP43P17677 238 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ATP4AP20648 1035 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 RFTN1Q14699 578 aaPredicted RBP4.65□□□□□ -1.66
HERC4-204ENST00000395198 TERF2Q15554 542 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 DIXDC1Q155Q3 683 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 C8orf34Q49A92 452 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 NEK5Q6P3R8 708 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ZYG11AQ6WRX3 759 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.65□□□□□ -1.66
HERC4-204ENST00000395198 CCDC13Q8IYE1 715 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 TMEM57Q8N5G2 664 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 ZBTB8BQ8NAP8 495 aaPredicted RBP4.65□□□□□ -1.66
HERC4-204ENST00000395198 PCYOX1LQ8NBM8 494 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 RNF214Q8ND24 703 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 MTMR9Q96QG7 549 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 LLPHQ9BRT6 129 aaKnown RBP4.65□□□□□ -1.66
HERC4-204ENST00000395198 MENTQ9BUN1 341 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 MROH8Q9H579 483 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 CRTAC1Q9NQ79 661 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.65□□□□□ -1.66
HERC4-204ENST00000395198 PPP1R14DQ9NXH3 145 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 IL20Q9NYY1 176 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms