RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SEPT6Q14141 434 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ZFPM1Q8IX07 1006 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 CCDC13Q8IYE1 715 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SMYD4Q8IYR2 804 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 ZNF280CQ8ND82 737 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 STMN2Q93045 179 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ABTB1Q969K4 478 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 HVCN1Q96D96 273 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 TSGA10Q9BZW7 698 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RIOX1Q9H6W3 641 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GGA3Q9NZ52 723 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RWDD2AQ9UIY3 292 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 HPCAL4Q9UM19 191 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SCAF8Q9UPN6 1271 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 RASSF10A6NK89 507 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 LRRIQ3A6PVS8 624 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 DNM2P50570 870 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SESN3P58005 492 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RASSF7Q02833 373 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RBL2Q08999 1139 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 STRN3Q13033 797 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 DRP2Q13474 957 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 MTMR2Q13614 643 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 CUL4BQ13620 913 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 PTPAQ15257 358 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 KLHL7Q8IXQ5 586 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 FAM178BQ8IXR5 827 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RBM46Q8TBY0 533 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 DPF2Q92785 391 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 P2RX5Q93086 422 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RMDN3Q96TC7 470 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 CCSER1Q9C0I3 900 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 DNAI2Q9GZS0 605 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 STMN4Q9H169 189 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 FBXO40Q9UH90 709 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SCOCQ9UIL1 159 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 POTEMA6NI47 508 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 MEIS1O00470 390 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 EXOC3O60645 756 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 NPM3O75607 178 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 PPP1R37O75864 691 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 CPP00450 1065 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GAP43P17677 238 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 HMGCS2P54868 508 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 MRPS25P82663 173 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 SLC7A5Q01650 507 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GUCY2DQ02846 1103 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 DYNC1I2Q13409 638 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 KCNB1Q14721 858 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 COG2Q14746 738 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 CFAP221Q4G0U5 840 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 PREPLQ4J6C6 727 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 BRDTQ58F21 947 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 PRAMEF18Q5VWM3 479 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SNRNP48Q6IEG0 339 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 RSRC2Q7L4I2 434 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 WHAMMQ8TF30 809 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ZNF473Q8WTR7 871 aaKnown RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 GLG1Q92896 1179 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ATP6V0A1Q93050 837 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 IQCDQ96DY2 449 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GMCL1Q96IK5 515 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 CCT8L2Q96SF2 557 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 BPIFA3Q9BQP9 254 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 RNF146Q9NTX7 359 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 FAM198AQ9UFP1 575 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 WNT10BO00744 389 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SH3BGRP55822 239 aaPredicted RBP6.17□□□□□ -1.42
RFFL-202ENST00000394597 ARID5AQ03989 594 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ADCY2Q08462 1091 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 MTF1Q14872 753 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 FAM102BQ5T8I3 360 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 SH2D3CQ8N5H7 860 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 GMCL1P1Q8NEA9 526 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ENGASEQ8NFI3 743 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 OR8K1Q8NGG5 319 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 ACER1Q8TDN7 264 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 OSBPL1AQ9BXW6 950 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 NRBP2Q9NSY0 501 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 TMX2Q9Y320 296 aa6.17□□□□□ -1.42
RFFL-202ENST00000394597 XIRP1Q702N8 1843 aaKnown RBP6.16□□□□□ -1.42
RFFL-202ENST00000394597 GSTTP1A0A1W2PQM5 241 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 PP2D1A8MPX8 630 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 MAP2K7O14733 419 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 EVI5O60447 810 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 SRGAP2O75044 1071 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 CCNE1P24864 410 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 TOB1P50616 345 aaPredicted RBP6.16□□□□□ -1.42
RFFL-202ENST00000394597 COPB1P53618 953 aaKnown RBP6.16□□□□□ -1.42
RFFL-202ENST00000394597 ADAM9Q13443 819 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 IFI16Q16666 785 aaKnown RBP6.16□□□□□ -1.42
RFFL-202ENST00000394597 EMBQ6PCB8 327 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 C2orf69Q8N8R5 385 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 NOA1Q8NC60 698 aaKnown RBP6.16□□□□□ -1.42
RFFL-202ENST00000394597 KCNV2Q8TDN2 545 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 ARHGEF2Q92974 986 aaKnown RBP6.16□□□□□ -1.42
RFFL-202ENST00000394597 EPN3Q9H201 632 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 PNMA3Q9UL41 463 aa6.16□□□□□ -1.42
RFFL-202ENST00000394597 ADGRG1Q9Y653 693 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms