RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 HIP1RO75146 1068 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 CASP5P51878 434 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 NPEPPSP55786 919 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 UBASH3AP57075 661 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 XKR9Q5GH70 373 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 TMEM63BQ5T3F8 832 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 MSL3Q8N5Y2 521 aaKnown RBP22.49■■□□□ 1.19
HDDC3-202ENST00000394272 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
HDDC3-202ENST00000394272 FIZ1Q96SL8 496 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 SH2D3AQ9BRG2 576 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 TINF2Q9BSI4 451 aa22.49■■□□□ 1.19
HDDC3-202ENST00000394272 HOXC6P09630 235 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 HSDL1Q3SXM5 330 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 XKR3Q5GH77 459 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 TRMT1LQ7Z2T5 733 aaKnown RBP22.48■■□□□ 1.19
HDDC3-202ENST00000394272 IRF2BP1Q8IU81 584 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 AFAP1L1Q8TED9 768 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 USP6NLQ92738 828 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 NAP1L5Q96NT1 182 aaPredicted RBP22.48■■□□□ 1.19
HDDC3-202ENST00000394272 GPR20Q99678 358 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 TIPINQ9BVW5 301 aa22.48■■□□□ 1.19
HDDC3-202ENST00000394272 USO1O60763 962 aaKnown RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 KIF20AO95235 890 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 TCF7P36402 384 aaPredicted RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 LRRC63Q05C16 580 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 ZCWPW2Q504Y3 356 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 MYCT1Q8N699 235 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 COPS5Q92905 334 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 THAP9Q9H5L6 903 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 MRPL44Q9H9J2 332 aaKnown RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 CREBZFQ9NS37 354 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 CBFA2T2O43439 604 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 ALDH1A1P00352 501 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 BMT2Q1RMZ1 405 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 DEFB115Q30KQ5 88 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 DHX37Q8IY37 1157 aaKnown RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 CSGALNACT2Q8N6G5 542 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 NOC3LQ8WTT2 800 aaKnown RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 CEP170P1Q96L14 293 aa22.47■■□□□ 1.19
HDDC3-202ENST00000394272 SRRTQ9BXP5 876 aaKnown RBP22.47■■□□□ 1.19
HDDC3-202ENST00000394272 LRRC10BA6NIK2 292 aa22.46■■□□□ 1.19
HDDC3-202ENST00000394272 SPAG1Q07617 926 aa22.46■■□□□ 1.19
HDDC3-202ENST00000394272 SPC24Q8NBT2 197 aa22.46■■□□□ 1.19
HDDC3-202ENST00000394272 KCTD10Q9H3F6 313 aa22.46■■□□□ 1.19
HDDC3-202ENST00000394272 ABHD16BQ9H3Z7 469 aa22.46■■□□□ 1.19
HDDC3-202ENST00000394272 INTS13Q9NVM9 706 aa22.46■■□□□ 1.19
HDDC3-202ENST00000394272 SEPT9Q9UHD8 586 aaPredicted RBP22.46■■□□□ 1.19
HDDC3-202ENST00000394272 LGR5O75473 907 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 ECM2O94769 699 aaPredicted RBP22.45■■□□□ 1.19
HDDC3-202ENST00000394272 OATP04181 439 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 MYBP10242 640 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 TCP11X2Q5H9J9 407 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 FAM160B1Q5W0V3 765 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 TRIM44Q96DX7 344 aaPredicted RBP22.45■■□□□ 1.19
HDDC3-202ENST00000394272 CAPNS2Q96L46 248 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 SPATA33Q96N06 139 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 CYP26B1Q9NR63 512 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 LIMA1Q9UHB6 759 aaKnown RBP22.45■■□□□ 1.19
HDDC3-202ENST00000394272 GJD2Q9UKL4 321 aa22.45■■□□□ 1.19
HDDC3-202ENST00000394272 A0A1B0GTH6 734 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 KCNJ18B7U540 433 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 NOP56O00567 594 aaKnown RBP22.45■■□□□ 1.18
HDDC3-202ENST00000394272 AOC2O75106 756 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 HOXD13P35453 343 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 STAT5BP51692 787 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 ARHGAP1Q07960 439 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 KCNJ12Q14500 433 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 HS1BP3Q53T59 392 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 MAEAQ7L5Y9 396 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 ZNF507Q8TCN5 953 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 PDLIM7Q9NR12 457 aa22.45■■□□□ 1.18
HDDC3-202ENST00000394272 EIF3DO15371 548 aaKnown RBP eCLIP22.44■■□□□ 1.18
HDDC3-202ENST00000394272 GCNT3O95395 438 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 YY1P25490 414 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 CTGFP29279 349 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 ADCYAP1R1P41586 468 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 APLP1P51693 650 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 ACVR2BQ13705 512 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 KRT31Q15323 416 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 ODR4Q5SWX8 454 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 ZNF720Q7Z2F6 126 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 NELFCDQ8IXH7 590 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 FAM178BQ8IXR5 827 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 SOCS4Q8WXH5 440 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 EMID1Q96A84 441 aaPredicted RBP22.44■■□□□ 1.18
HDDC3-202ENST00000394272 DRC1Q96MC2 740 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 CTAGE1Q96RT6 745 aa22.44■■□□□ 1.18
HDDC3-202ENST00000394272 NIFKQ9BYG3 293 aaKnown RBP22.44■■□□□ 1.18
HDDC3-202ENST00000394272 DGAT1O75907 488 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 PTMAP06454 111 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 PTGS1P23219 599 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 EEF1GP26641 437 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 NMT1P30419 496 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 IRF5Q13568 498 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 NR1I3Q14994 352 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 DRC7Q8IY82 874 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 TSG101Q99816 390 aa22.43■■□□□ 1.18
HDDC3-202ENST00000394272 LARSQ9P2J5 1176 aaKnown RBP22.43■■□□□ 1.18
HDDC3-202ENST00000394272 EMSYQ7Z589 1322 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms